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20 ⌀ | j_cigar_heavy stringlengths 7 17 | v_support_heavy stringlengths 5 23 | d_support_heavy stringlengths 3 9 ⌀ | j_support_heavy stringlengths 5 22 | v_identity_heavy stringlengths 4 6 | d_identity_heavy stringclasses 96 values | j_identity_heavy stringclasses 227 values | v_sequence_start_heavy stringclasses 274 values | v_sequence_end_heavy stringclasses 297 values | v_germline_start_heavy stringclasses 23 values | v_germline_end_heavy stringclasses 31 values | d_sequence_start_heavy stringclasses 301 values | d_sequence_end_heavy stringclasses 310 values | d_germline_start_heavy stringclasses 33 values | d_germline_end_heavy stringclasses 37 values | j_sequence_start_heavy stringclasses 460 values | j_sequence_end_heavy stringclasses 459 values | j_germline_start_heavy stringclasses 60 values | j_germline_end_heavy stringclasses 53 values | fwr1_start_heavy stringclasses 274 values | fwr1_end_heavy stringclasses 272 values | cdr1_start_heavy stringclasses 272 values | 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v_germline_alignment_aa_light stringlengths 87 106 | d_sequence_alignment_light stringclasses 2 values | d_sequence_alignment_aa_light stringclasses 2 values | d_germline_alignment_light stringclasses 2 values | d_germline_alignment_aa_light stringclasses 2 values | j_sequence_alignment_light stringlengths 7 58 | j_sequence_alignment_aa_light stringlengths 2 19 | j_germline_alignment_light stringclasses 710 values | j_germline_alignment_aa_light stringclasses 146 values | fwr1_light stringlengths 60 108 | fwr1_aa_light stringlengths 20 36 | cdr1_light stringlengths 6 66 | cdr1_aa_light stringlengths 2 22 | fwr2_light stringlengths 43 78 | fwr2_aa_light stringlengths 14 26 | cdr2_light stringlengths 1 42 ⌀ | cdr2_aa_light stringlengths 2 14 ⌀ | fwr3_light stringlengths 87 159 | fwr3_aa_light stringlengths 29 53 | fwr4_light stringlengths 13 33 ⌀ | fwr4_aa_light stringlengths 4 11 ⌀ | cdr3_light stringlengths 12 69 | cdr3_aa_light stringlengths 4 23 | junction_light stringlengths 18 75 | junction_length_light stringclasses 19 values | junction_aa_light stringlengths 6 25 | junction_aa_length_light stringclasses 19 values | v_score_light stringclasses 164 values | d_score_light stringclasses 2 values | j_score_light stringclasses 31 values | v_cigar_light stringlengths 10 25 | d_cigar_light stringclasses 2 values | j_cigar_light stringlengths 7 16 | v_support_light stringlengths 5 23 | d_support_light stringclasses 2 values | j_support_light stringlengths 5 9 | v_identity_light stringlengths 4 6 | d_identity_light stringclasses 1 value | j_identity_light stringclasses 87 values | v_sequence_start_light stringclasses 300 values | v_sequence_end_light stringclasses 321 values | v_germline_start_light stringclasses 13 values | v_germline_end_light stringclasses 56 values | d_sequence_start_light stringclasses 2 values | d_sequence_end_light stringclasses 2 values | d_germline_start_light stringclasses 2 values | d_germline_end_light stringclasses 2 values | j_sequence_start_light stringclasses 453 values | j_sequence_end_light stringclasses 453 values | j_germline_start_light stringclasses 20 values | j_germline_end_light stringclasses 37 values | fwr1_start_light stringclasses 300 values | fwr1_end_light stringclasses 300 values | cdr1_start_light stringclasses 300 values | cdr1_end_light stringclasses 301 values | fwr2_start_light stringclasses 301 values | fwr2_end_light stringclasses 301 values | cdr2_start_light stringclasses 475 values | cdr2_end_light stringclasses 473 values | fwr3_start_light stringclasses 300 values | fwr3_end_light stringclasses 300 values | fwr4_start_light stringclasses 311 values | fwr4_end_light stringclasses 313 values | cdr3_start_light stringclasses 300 values | cdr3_end_light stringclasses 311 values | np1_light stringlengths 1 44 ⌀ | np1_length_light stringclasses 70 values | np2_light stringclasses 2 values | np2_length_light stringclasses 2 values | c_region_light stringlengths 1 516 ⌀ | Isotype_light stringclasses 2 values | Redundancy_light stringclasses 1 value | ANARCI_numbering_light stringlengths 920 1.61k | ANARCI_status_light stringclasses 128 values |
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1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGACACGAC-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGCAGGAGCAGTGGCTGCCTCCAAGGGTTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGCAGGAGCAGTGGCTGCCTCCAAGGGTTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNAGCAGTGGCTGNNNNNNNNNNNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAGAVAASKGYYYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXAVAXXXXXYYYYYGMDVWGQGTTVTVSS | 1 | 295 | 300.0 | 310.0 | 323 | 384 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | AGCAGTGGCTG | AVA | AGCAGTGGCTG | AVA | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGCAGGAGCAGTGGCTGCCTCCAAGGGTTATTACTACTACTACTACGGTATGGACGTC | ARAGAVAASKGYYYYYYGMDV | TGTGCGAGAGCAGGAGCAGTGGCTGCCTCCAAGGGTTATTACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARAGAVAASKGYYYYYYGMDVW | 23.0 | 461.479 | 21.837 | 119.894 | 121S295M161S1N | 420S6N11M146S4N | 443S62M72S | 8.075e-132 | 0.06902 | 4.551e-31 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 421.0 | 431.0 | 7.0 | 17.0 | 444 | 505 | 1 | 62 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 473.0 | 505.0 | 410.0 | 472.0 | CAGG | 4 | CCTCCAAGGGTT | 12.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'G', '109 ': 'A', '110 ': 'V', '111 ': 'A', '111A': 'A', '111B': 'S', '111C': 'K', '111D': 'G', '112D': 'Y', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGACACGAC-1_contig_1 | GCTGCGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCTGGTCCCCTCTCTTCCTCACCCTCATCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-36*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNVVVFGGGTKLTVL | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNXVVFGGGTKLTVL | 1 | 292 | null | null | 294 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATG | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLN | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATG | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLN | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGC | QSVLTQPPSVSEAPRQRVTISCSGS | AGCTCCAACATCGGAAATAATGCT | SSNIGNNA | GTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTAT | VNWYQQLPGKAPKLLIY | TATGATGAT | YDD | CTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | LLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGTTGTGGTA | AAWDDSLNVVV | TGTGCAGCATGGGATGACAGCCTGAATGTTGTGGTATTC | 39.0 | CAAWDDSLNVVVF | 13.0 | 456.805 | null | 73.749 | 97S292M250S4N | null | 390S38M211S | 2.295e-130 | null | 3.927e-17 | 100.0 | null | 100.0 | 98 | 389 | 1 | 292 | null | null | null | null | 391 | 428 | 1 | 38 | 98 | 172 | 173 | 196 | 197 | 247 | 248 | 256 | 257 | 364 | 398.0 | 427.0 | 365.0 | 397.0 | T | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'A', '15 ': 'P', '16 ': 'R', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'A'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Y', '57 ': 'D', '65 ': 'D'}, 'fwl3': {'66 ': 'L', '67 ': 'L', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'V', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGACCACGA-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACAGTCTATCCGCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | null | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACAGTCTATCCGCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDSLSAWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXXXWGQGTLVTVSS | 1 | 296 | null | null | 310 | 343 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | null | null | null | null | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACAGTCTATCCGCT | ARDSLSA | TGTGCGAGAGACAGTCTATCCGCTTGG | 27.0 | CARDSLSAW | 9.0 | 463.037 | null | 66.059 | 121S296M118S | null | 430S14N34M71S | 2.547e-132 | null | 6.77e-15 | 100.0 | null | 100.0 | 122 | 417 | 1 | 296 | null | null | null | null | 431 | 464 | 15 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 431.0 | 463.0 | 410.0 | 430.0 | CAGTCTATCCGCT | 13 | null | null | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'S', '115 ': 'L', '116 ': 'S', '117 ': 'A'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGACCACGA-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTTGGGTG | AAWDDSLNGWV | TGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTC | 39.0 | CAAWDDSLNGWVF | 13.0 | 459.921 | null | 71.827 | 104S294M248S2N | null | 398S1N37M211S | 2.6770000000000004e-131 | null | 1.506e-16 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 399 | 435 | 2 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGACTGGGT-1_contig_1 | CCACATCCCTCCTCAGAAGCCCCCAGAGCACAACTCCTTACCATGGACTGGACCTGGAGGATCCTCTTTTTGGTGGCAGCAGCCACAGGTGCCCACTCCCAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAAGCTCGGACTACGGTGCCGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-3*01 | IGHD4-17*01 | IGHJ6*02 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAAGCTCGGACTACGGTGCCGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGANNNNNNGACTACGGTGNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARSSDYGADYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARXXDYGXXYYYYGMDVWGQGTTVTVSS | 1 | 294 | 301.0 | 310.0 | 314 | 372 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | GACTACGGTG | DYG | GACTACGGTG | DYG | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGG | MHWVRQAPGQRLEWMGW | ATCAACGCTGGCAATGGTAACACA | INAGNGNT | AAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGT | KYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAAGCTCGGACTACGGTGCCGACTACTACTACTACGGTATGGACGTC | ARSSDYGADYYYYGMDV | TGTGCGAGAAGCTCGGACTACGGTGCCGACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARSSDYGADYYYYGMDVW | 19.0 | 459.921 | 19.914 | 114.126 | 99S294M150S2N | 399S1N10M134S5N | 412S3N59M72S | 2.2430000000000002e-131 | 0.246 | 2.331e-29 | 100.0 | 100.0 | 100.0 | 100 | 393 | 1 | 294 | 400.0 | 409.0 | 2.0 | 11.0 | 413 | 471 | 4 | 62 | 100 | 174 | 175 | 198 | 199 | 249 | 250 | 273 | 274 | 387 | 439.0 | 471.0 | 388.0 | 438.0 | AGCTCG | 6 | CCG | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'A', '59 ': 'G', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'K', '67 ': 'Y', '68 ': 'S', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'A', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'S', '109 ': 'D', '110 ': 'Y', '111 ': 'G', '111A': 'A', '111B': 'D', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGACTGGGT-1_contig_2 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ1*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVFGTGTKVTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVFGTGTKVTVL | 1 | 288 | null | null | 289 | 322 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAATCAGCAGACAGCAGTGGTACTTATGTC | QSADSSGTYV | TGTCAATCAGCAGACAGCAGTGGTACTTATGTCTTC | 36.0 | CQSADSSGTYVF | 12.0 | 450.572 | null | 66.059 | 100S288M245S2N | null | 388S4N34M211S | 1.7090000000000002e-128 | null | 8.037e-15 | 100.0 | null | 100.0 | 101 | 388 | 1 | 288 | null | null | null | null | 389 | 422 | 5 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'T', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGCGTCTAT-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCTAAGTCTACACCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD4-4*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCTAAGTCTACACCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNCTACANNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDLSLHHDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXLXXDYWGQGTLVTVSS | 1 | 302 | 310.0 | 314.0 | 318 | 358 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | CTACA | L | CTACA | L | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGATCTAAGTCTACACCATGACTAC | TTDLSLHHDY | TGTACCACAGATCTAAGTCTACACCATGACTACTGG | 36.0 | CTTDLSLHHDYW | 12.0 | 472.386 | 10.301 | 79.518 | 137S302M127S | 446S3N5M115S8N | 454S7N41M71S | 4.145e-135 | 201.0 | 6.369e-19 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 447.0 | 451.0 | 4.0 | 8.0 | 455 | 495 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 462.0 | 494.0 | 432.0 | 461.0 | TCTAAGT | 7 | CCA | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'L', '109 ': 'S', '113 ': 'L', '114 ': 'H', '115 ': 'H', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGCGTCTAT-1_contig_2 | GTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHWVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHWVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCAT | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCAT | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCATTGGGTG | YSTDSSGNHWV | TGTTACTCAACAGACAGCAGTGGTAATCATTGGGTGTTC | 39.0 | CYSTDSSGNHWVF | 13.0 | 450.572 | null | 71.827 | 92S288M248S2N | null | 380S1N37M211S | 1.695e-128 | null | 1.463e-16 | 100.0 | null | 100.0 | 93 | 380 | 1 | 288 | null | null | null | null | 381 | 417 | 2 | 38 | 93 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 387.0 | 416.0 | 354.0 | 386.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGCTAACAA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCAGAGGTTACTAGAGCAGTGGCTGGCGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-19*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCAGAGGTTACTAGAGCAGTGGCTGGCGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNNNNNNNNAGCAGTGGCTGGNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDQRLLEQWLAYFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXQWLXYFDYWGQGTLVTVSS | 1 | 296 | 311.0 | 322.0 | 325 | 370 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | AGCAGTGGCTGG | QWL | AGCAGTGGCTGG | QWL | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATCAGAGGTTACTAGAGCAGTGGCTGGCGTACTTTGACTAC | AKDQRLLEQWLAYFDY | TGTGCGAAAGATCAGAGGTTACTAGAGCAGTGGCTGGCGTACTTTGACTACTGG | 54.0 | CAKDQRLLEQWLAYFDYW | 18.0 | 463.037 | 23.76 | 89.131 | 136S296M145S | 446S6N12M119S3N | 460S2N46M71S | 2.742e-132 | 0.01821 | 8.291999999999999e-22 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 447.0 | 458.0 | 7.0 | 18.0 | 461 | 506 | 3 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | TCAGAGGTTACTAG | 14 | CG | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'Q', '109 ': 'R', '110 ': 'L', '111 ': 'L', '111A': 'E', '112B': 'Q', '112A': 'W', '112 ': 'L', '113 ': 'A', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGCTAACAA-1_contig_1 | GGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYTFGQGTKLEIK | 1 | 283 | null | null | 284 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCTGTACACT | QQSYSTLYT | TGTCAACAGAGTTACAGTACCCTGTACACTTTT | 33.0 | CQQSYSTLYTF | 11.0 | 442.782 | null | 75.672 | 96S283M175S4N | null | 379S39M136S | 3.307e-126 | null | 8.957e-18 | 100.0 | null | 100.0 | 97 | 379 | 1 | 283 | null | null | null | null | 380 | 418 | 1 | 39 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGCTGCCCA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAACGACTACAGCTATGGTTTCCCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-18*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAACGACTACAGCTATGGTTTCCCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNTACAGCTATGGTTNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDNDYSYGFPDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYSYGXXDYWGQGTLVTVSS | 1 | 296 | 304.0 | 316.0 | 322 | 361 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TACAGCTATGGTT | YSYG | TACAGCTATGGTT | YSYG | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATAACGACTACAGCTATGGTTTCCCGGACTAC | AKDNDYSYGFPDY | TGTGCGAAAGATAACGACTACAGCTATGGTTTCCCGGACTACTGG | 45.0 | CAKDNDYSYGFPDYW | 15.0 | 463.037 | 25.682 | 77.595 | 136S296M136S | 439S5N13M116S2N | 457S8N40M71S | 2.7120000000000002e-132 | 0.004726 | 2.423e-18 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 440.0 | 452.0 | 6.0 | 18.0 | 458 | 497 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | TAACGAC | 7 | TCCCG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'N', '109 ': 'D', '110 ': 'Y', '111 ': 'S', '112 ': 'Y', '113 ': 'G', '114 ': 'F', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGCTGCCCA-1_contig_1 | AGGAATCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-16*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTAT | LAWYQQKPEKAPKSLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGC | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTACCCGTGGACG | QQYNSYPWT | TGCCAACAGTATAATAGTTACCCGTGGACGTTC | 33.0 | CQQYNSYPWTF | 11.0 | 444.34 | null | 73.749 | 93S284M174S3N | null | 377S38M136S | 1.117e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'E', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'S', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGAGGGATCTG-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGGGTTGGTAGGGTGGTATTACTATGATAGTAGCGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*04 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGGGTTGGTAGGGTGGTATTACTATGATAGTAGCGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGNNNNNNNNNNNNNGTATTACTATGATAGTAGNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRGLVGWYYYDSSDDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXXXXYYYDSXXDYWGQGTLVTVSS | 1 | 301 | 315.0 | 332.0 | 336 | 376 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GTATTACTATGATAGTAG | YYYDS | GTATTACTATGATAGTAG | YYYDS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVQPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWVRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGAGGGTTGGTAGGGTGGTATTACTATGATAGTAGCGATGACTAC | TRGLVGWYYYDSSDDY | TGTACTAGAGGGTTGGTAGGGTGGTATTACTATGATAGTAGCGATGACTACTGG | 54.0 | CTRGLVGWYYYDSSDDYW | 18.0 | 470.828 | 35.296 | 79.518 | 137S301M146S1N | 451S18M115S13N | 472S7N41M71S | 1.254e-134 | 6.206e-06 | 6.576e-19 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 452.0 | 469.0 | 1.0 | 18.0 | 473 | 513 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 480.0 | 512.0 | 432.0 | 479.0 | GGTTGGTAGGGTG | 13 | CGA | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'G', '108 ': 'L', '109 ': 'V', '110 ': 'G', '111 ': 'W', '111A': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'D', '113 ': 'S', '114 ': 'S', '115 ': 'D', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGAGGGATCTG-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATAGGGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATAGGGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATNNNGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNRVVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNXVVFGGGTKLTVL | 1 | 294 | null | null | 298 | 334 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATAGGGTGGTA | SSYAGSNNRVV | TGCAGCTCATATGCAGGCAGCAACAATAGGGTGGTATTC | 39.0 | CSSYAGSNNRVVF | 13.0 | 459.921 | null | 71.827 | 98S294M251S3N | null | 395S1N37M211S | 2.6640000000000004e-131 | null | 1.498e-16 | 100.0 | null | 100.0 | 99 | 392 | 1 | 294 | null | null | null | null | 396 | 432 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | AGG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '113 ': 'N', '114 ': 'N', '115 ': 'R', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGCAACTGCTA-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCCAGGGGGTCCCGAGGGTGGCTACGATTTGGGTAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCCAGGGGGTCCCGAGGGTGGCTACGATTTGGGTAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNGTGGCTACGATTNNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASQGVPRVATIWVDFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAXXXXXXVATIXXXFDYWGQGTLVTVSS | 1 | 293 | 310.0 | 321.0 | 329 | 373 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | GTGGCTACGATT | VATI | GTGGCTACGATT | VATI | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCCAGGGGGTCCCGAGGGTGGCTACGATTTGGGTAGACTTTGACTAC | ASQGVPRVATIWVDFDY | TGTGCGAGCCAGGGGGTCCCGAGGGTGGCTACGATTTGGGTAGACTTTGACTACTGG | 57.0 | CASQGVPRVATIWVDFDYW | 19.0 | 458.363 | 23.76 | 87.208 | 115S293M151S3N | 424S9N12M123S2N | 443S3N45M71S | 6.810000000000005e-131 | 0.01763 | 3.044e-21 | 100.0 | 100.0 | 100.0 | 116 | 408 | 1 | 293 | 425.0 | 436.0 | 10.0 | 21.0 | 444 | 488 | 4 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 455.0 | 487.0 | 404.0 | 454.0 | CCAGGGGGTCCCGAGG | 16 | TGGGTAG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'Q', '108 ': 'G', '109 ': 'V', '110 ': 'P', '111 ': 'R', '111A': 'V', '111B': 'A', '112B': 'T', '112A': 'I', '112 ': 'W', '113 ': 'V', '114 ': 'D', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGCAACTGCTA-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCCCTAAAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-30*01 | null | IGKJ2*01 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCCCTAAAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCNNNNNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPLKYTFGQGTKLEIK | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPXXYTFGQGTKLEIK | 1 | 299 | null | null | 306 | 343 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DVVMTQSPLSLPVTLGQPASISCRSS | CAAAGCCTCGTATACAGTGATGGAAACACCTAC | QSLVYSDGNTY | TTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTAT | LNWFQQRPGQSPRRLIY | AAGGTTTCT | KVS | AACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGGTACACACTGGCCCCTAAAGTACACT | MQGTHWPLKYT | TGCATGCAAGGTACACACTGGCCCCTAAAGTACACTTTT | 39.0 | CMQGTHWPLKYTF | 13.0 | 467.712 | null | 73.749 | 90S299M180S3N | null | 395S1N38M136S | 1.064e-133 | null | 3.49e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 396 | 433 | 2 | 39 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 403.0 | 432.0 | 370.0 | 402.0 | CCTAAA | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'V', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'V', '31 ': 'Y', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'R', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'D', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'G', '108 ': 'T', '109 ': 'H', '110 ': 'W', '113 ': 'P', '114 ': 'L', '115 ': 'K', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGCACGCCAGT-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGGGTAGCAGTTTCCCCCCACCGCATGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-19*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGGGTAGCAGTTTCCCCCCACCGCATGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNTAGCAGTNNNNNNNNNNNNNNNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDRVAVSPHRMDYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXAVXXXXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 302.0 | 308.0 | 326 | 381 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TAGCAGT | AV | TAGCAGT | AV | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATAGGGTAGCAGTTTCCCCCCACCGCATGGACTACTACTACGGTATGGACGTC | ARDRVAVSPHRMDYYYGMDV | TGTGCGAGAGATAGGGTAGCAGTTTCCCCCCACCGCATGGACTACTACTACGGTATGGACGTCTGG | 66.0 | CARDRVAVSPHRMDYYYGMDVW | 22.0 | 463.037 | 14.146 | 108.358 | 136S296M157S | 437S5N7M145S9N | 461S6N56M72S | 2.802e-132 | 14.56 | 1.3800000000000002e-27 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 438.0 | 444.0 | 6.0 | 12.0 | 462 | 517 | 7 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 485.0 | 517.0 | 425.0 | 484.0 | TAGGG | 5 | TTCCCCCCACCGCATGG | 17.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'V', '110 ': 'A', '111 ': 'V', '111A': 'S', '111B': 'P', '111C': 'H', '112D': 'R', '112C': 'M', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGCACGCCAGT-1_contig_1 | GGAGGAGTCAGACCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCCTTTACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-6*01 | null | IGKJ2*01 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCCTTTACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCNNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPFTFGQGTKLEIK | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPXTFGQGTKLEIK | 1 | 284 | null | null | 289 | 322 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | AIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LGWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CTACAAGATTACAATTACCCCTTTACT | LQDYNYPFT | TGTCTACAAGATTACAATTACCCCTTTACTTTT | 33.0 | CLQDYNYPFTF | 11.0 | 444.34 | null | 66.059 | 95S284M174S3N | null | 383S5N34M136S | 1.121e-126 | null | 7.003e-15 | 100.0 | null | 100.0 | 96 | 379 | 1 | 284 | null | null | null | null | 384 | 417 | 6 | 39 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | CTTT | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'D', '108 ': 'Y', '109 ': 'N', '114 ': 'Y', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGCAGCCAGAA-1_contig_2 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGACACCGATGACCAGCTGCTACGGGCTGCTATGGTGCCGAGGGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGACACCGATGACCAGCTGCTACGGGCTGCTATGGTGCCGAGGGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNACCAGCTGCTANNNNNNNNNNNNNNNNNNNNNGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDTDDQLLRAAMVPRGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXXXQLLXXXXXXXGMDVWGQGTTVTVSS | 1 | 296 | 305.0 | 315.0 | 337 | 381 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | ACCAGCTGCTA | QLL | ACCAGCTGCTA | QLL | GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGACACCGATGACCAGCTGCTACGGGCTGCTATGGTGCCGAGGGGTATGGACGTC | ARDTDDQLLRAAMVPRGMDV | TGTGCGAGAGACACCGATGACCAGCTGCTACGGGCTGCTATGGTGCCGAGGGGTATGGACGTCTGG | 66.0 | CARDTDDQLLRAAMVPRGMDVW | 22.0 | 463.037 | 21.837 | 87.208 | 115S296M157S | 419S16N11M138S4N | 451S17N45M72S | 2.7120000000000002e-132 | 0.06793 | 3.0940000000000002e-21 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 420.0 | 430.0 | 17.0 | 27.0 | 452 | 496 | 18 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 464.0 | 496.0 | 404.0 | 463.0 | CACCGATG | 8 | CGGGCTGCTATGGTGCCGAGG | 21.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'T', '109 ': 'D', '110 ': 'D', '111 ': 'Q', '111A': 'L', '111B': 'L', '111C': 'R', '112D': 'A', '112C': 'A', '112B': 'M', '112A': 'V', '112 ': 'P', '113 ': 'R', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGCAGCCAGAA-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTTCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTTCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPSLTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPXLTFGGGTKVEIK | 1 | 285 | null | null | 288 | 325 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCT | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCT | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCCTTCGCTCACT | QQRSNWPSLT | TGTCAGCAGCGTAGCAACTGGCCTTCGCTCACTTTC | 36.0 | CQQRSNWPSLTF | 12.0 | 445.898 | null | 73.749 | 107S285M176S2N | null | 394S38M136S | 3.915e-127 | null | 3.483e-17 | 100.0 | null | 100.0 | 108 | 392 | 1 | 285 | null | null | null | null | 395 | 432 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | TC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'S', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGCAGGCGATA-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCCATAGTGGGAGCTACTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCCATAGTGGGAGCTACTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNATAGTGGGAGCTACTNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARAIVGATLDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXIVGATXDYWGQGTLVTVSS | 1 | 295 | 298.0 | 312.0 | 314 | 355 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ATAGTGGGAGCTACT | IVGAT | ATAGTGGGAGCTACT | IVGAT | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCCATAGTGGGAGCTACTCTTGACTAC | ARAIVGATLDY | TGTGCGAGAGCCATAGTGGGAGCTACTCTTGACTACTGG | 39.0 | CARAIVGATLDYW | 13.0 | 461.479 | 29.528 | 81.44 | 124S295M131S1N | 421S3N15M114S2N | 437S6N42M71S | 7.721e-132 | 0.0003182 | 1.631e-19 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 422.0 | 436.0 | 4.0 | 18.0 | 438 | 479 | 7 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 446.0 | 478.0 | 413.0 | 445.0 | CC | 2 | C | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'I', '109 ': 'V', '110 ': 'G', '113 ': 'A', '114 ': 'T', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGCAGGCGATA-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCTCCGTGGACG | QQYNNWPPWT | TGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTC | 36.0 | CQQYNNWPPWTF | 12.0 | 449.014 | null | 73.749 | 96S287M174S | null | 383S38M136S | 4.4230000000000005e-128 | null | 3.415e-17 | 100.0 | null | 100.0 | 97 | 383 | 1 | 287 | null | null | null | null | 384 | 421 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 391.0 | 420.0 | 361.0 | 390.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGCAGTGGAGT-1_contig_2 | ATCACATAACAACCAGATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGATATTGTAGTAGTACCAGCTGCTTGGAATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*02 | IGHD2-2*01 | IGHJ6*02 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGATATTGTAGTAGTACCAGCTGCTTGGAATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGATATTGTAGTAGTACCAGCTGCTNNNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAGYCSSTSCLEYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARYCSSTSCXXYYYYGMDVWGQGTTVTVSS | 1 | 294 | 295.0 | 316.0 | 322 | 378 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAG | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAR | TATTGTAGTAGTACCAGCTGCT | YCSSTSC | TATTGTAGTAGTACCAGCTGCT | YCSSTSC | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATACT | GGTFSSYT | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGG | ISWVRQAPGQGLEWMGR | ATCATCCCTATCCTTGGTATAGCA | IIPILGIA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGGGATATTGTAGTAGTACCAGCTGCTTGGAATACTACTACTACGGTATGGACGTC | AGYCSSTSCLEYYYYGMDV | TGTGCGGGATATTGTAGTAGTACCAGCTGCTTGGAATACTACTACTACGGTATGGACGTCTGG | 63.0 | CAGYCSSTSCLEYYYYGMDVW | 21.0 | 456.805 | 42.986 | 110.281 | 115S294M156S | 409S4N22M134S5N | 436S5N57M72S | 2.028e-130 | 2.904e-08 | 3.4890000000000003e-28 | 99.66 | 100.0 | 100.0 | 116 | 409 | 1 | 294 | 410.0 | 431.0 | 5.0 | 26.0 | 437 | 493 | 6 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 461.0 | 493.0 | 404.0 | 460.0 | null | 0 | TGGAA | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'T'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'L', '63 ': 'G', '64 ': 'I', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'G', '107 ': 'Y', '108 ': 'C', '109 ': 'S', '110 ': 'S', '111 ': 'T', '111A': 'S', '111B': 'C', '111C': 'L', '112C': 'E', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGCAGTGGAGT-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3D-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSTWTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXWTFGQGTKVEIK | 1 | 284 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGT | EIVLTQSPATLSLSPGERATLSCGAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTAT | LAWYQQKPGLAPRLLIY | GATGCATCC | DAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCTACGTGGACG | QQYGSSTWT | TGTCAGCAGTATGGTAGCTCTACGTGGACGTTC | 33.0 | CQQYGSSTWTF | 11.0 | 444.34 | null | 73.749 | 96S284M177S6N | null | 383S38M136S | 1.129e-126 | null | 3.415e-17 | 100.0 | null | 100.0 | 97 | 380 | 1 | 284 | null | null | null | null | 384 | 421 | 1 | 38 | 97 | 174 | 175 | 195 | 196 | 246 | 247 | 255 | 256 | 363 | 391.0 | 420.0 | 364.0 | 390.0 | TAC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'G', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'L', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTAACGCGA-1_contig_1 | GTCTTATCTGGGGACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGCGAATTACTATGATAGTAGTGGTTATTACTTCGTCCGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD3-22*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGCGAATTACTATGATAGTAGTGGTTATTACTTCGTCCGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNATTACTATGATAGTAGTGGTTATTACTNNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARANYYDSSGYYFVRWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARXXYYDSSGYYXXXWFDPWGQGTLVTVSS | 1 | 295 | 299.0 | 325.0 | 333 | 379 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCAR | ATTACTATGATAGTAGTGGTTATTACT | YYDSSGYY | ATTACTATGATAGTAGTGGTTATTACT | YYDSSGYY | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCGAATTACTATGATAGTAGTGGTTATTACTTCGTCCGCTGGTTCGACCCC | ARANYYDSSGYYFVRWFDP | TGTGCGAGAGCGAATTACTATGATAGTAGTGGTTATTACTTCGTCCGCTGGTTCGACCCCTGG | 63.0 | CARANYYDSSGYYFVRWFDPW | 21.0 | 461.479 | 52.6 | 91.054 | 125S295M155S1N | 423S2N27M125S2N | 457S4N47M71S | 8.045000000000001e-132 | 3.774e-11 | 2.1789999999999997e-22 | 100.0 | 100.0 | 100.0 | 126 | 420 | 1 | 295 | 424.0 | 450.0 | 3.0 | 29.0 | 458 | 504 | 5 | 51 | 126 | 200 | 201 | 224 | 225 | 275 | 276 | 299 | 300 | 413 | 471.0 | 503.0 | 414.0 | 470.0 | CGA | 3 | TCGTCCG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'N', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '111A': 'S', '111B': 'S', '111C': 'G', '112C': 'Y', '112B': 'Y', '112A': 'F', '112 ': 'V', '113 ': 'R', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTAACGCGA-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 94S283M247S2N | null | 377S2N36M211S | 3.727e-126 | null | 5.51e-16 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 378 | 413 | 3 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTACCGTTA-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAACCGACAGCCTACGATTTTTGGAGTGGTTTGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*01 | IGHD3-3*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAACCGACAGCCTACGATTTTTGGAGTGGTTTGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNNNNTACGATTTTTGGAGTGGTTNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARTDSLRFLEWFVFDYWGQGTLVTVSS | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXRFLEWXXFDYWGQGTLVTVSS | 1 | 291 | 302.0 | 320.0 | 324 | 367 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TACGATTTTTGGAGTGGTT | RFLEW | TACGATTTTTGGAGTGGTT | RFLEW | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLIQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAACCGACAGCCTACGATTTTTGGAGTGGTTTGTCTTTGACTAC | ARTDSLRFLEWFVFDY | TGTGCGAGAACCGACAGCCTACGATTTTTGGAGTGGTTTGTCTTTGACTACTGG | 54.0 | CARTDSLRFLEWFVFDYW | 18.0 | 455.247 | 37.218 | 85.286 | 130S291M147S2N | 431S4N19M118S8N | 453S4N44M71S | 6.006e-130 | 1.591e-06 | 1.173e-20 | 100.0 | 100.0 | 100.0 | 131 | 421 | 1 | 291 | 432.0 | 450.0 | 5.0 | 23.0 | 454 | 497 | 5 | 48 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 464.0 | 496.0 | 416.0 | 463.0 | ACCGACAGCC | 10 | TGT | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'I', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'L', '111 ': 'R', '111A': 'F', '112B': 'L', '112A': 'E', '112 ': 'W', '113 ': 'F', '114 ': 'V', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTACCGTTA-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCTCTCACT | QQYDNLPLT | TGTCAACAGTATGATAATCTCCCTCTCACTTTC | 33.0 | CQQYDNLPLTF | 11.0 | 447.456 | null | 69.904 | 97S286M172S1N | null | 383S2N36M136S | 1.2979999999999998e-127 | null | 4.89e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 384 | 419 | 3 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTATATGAG-1_contig_2 | GGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACACTAAGGTGGCTGGGTCCCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*01 | IGHD6-19*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACACTAAGGTGGCTGGGTCCCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACANNNNNGTGGCTGGNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHTKVAGSPFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXVAGXXFDYWGQGTLVTVSS | 1 | 298 | 304.0 | 311.0 | 318 | 361 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | GTGGCTGG | VAG | GTGGCTGG | VAG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGAATGATGATAAG | IYWNDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACACTAAGGTGGCTGGGTCCCCCTTTGACTAC | AHTKVAGSPFDY | TGTGCACACACTAAGGTGGCTGGGTCCCCCTTTGACTACTGG | 42.0 | CAHTKVAGSPFDYW | 14.0 | 466.153 | 16.069 | 85.286 | 81S298M134S3N | 384S10N8M121S3N | 398S4N44M71S | 2.81e-133 | 3.337 | 1.0570000000000001e-20 | 100.0 | 100.0 | 100.0 | 82 | 379 | 1 | 298 | 385.0 | 392.0 | 11.0 | 18.0 | 399 | 442 | 5 | 48 | 82 | 156 | 157 | 186 | 187 | 237 | 238 | 258 | 259 | 372 | 409.0 | 441.0 | 373.0 | 408.0 | CTAAG | 5 | GTCCCC | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'N', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'T', '108 ': 'K', '109 ': 'V', '110 ': 'A', '112 ': 'G', '113 ': 'S', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTATATGAG-1_contig_1 | GGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCGAGTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCGAGTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNNNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTRVFTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXXFTFGPGTKVDIK | 1 | 283 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCGAGTATTCACT | QQSYSTRVFT | TGTCAACAGAGTTACAGTACCCGAGTATTCACTTTC | 36.0 | CQQSYSTRVFTF | 12.0 | 442.782 | null | 73.749 | 95S283M178S4N | null | 382S38M136S | 3.3199999999999997e-126 | null | 3.408e-17 | 100.0 | null | 100.0 | 96 | 378 | 1 | 283 | null | null | null | null | 383 | 420 | 1 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 390.0 | 419.0 | 360.0 | 389.0 | GAGT | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'R', '115 ': 'V', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTCTAGCGC-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGAACTCACCATGGAGTTTGGACTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATGGCCCCTGACTACTATGATAGTAGCCCCAAGGGGGGGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-43*02 | IGHD3-22*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATGGCCCCTGACTACTATGATAGTAGCCCCAAGGGGGGGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATANNNNNNNNNNNTACTATGATAGTAGNNNNNNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKDMAPDYYDSSPKGGGFDYWGQGTLVTVSS | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKDXXXXYYDSXXXXXXFDYWGQGTLVTVSS | 1 | 298 | 310.0 | 323.0 | 339 | 382 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKD | TACTATGATAGTAG | YYDS | TACTATGATAGTAG | YYDS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGVVQPGGSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTT | MHWVRQAPGKGLEWVSL | ATTAGTGGGGATGGTGGTAGCACA | ISGDGGST | TACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGT | YYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAAAGATATGGCCCCTGACTACTATGATAGTAGCCCCAAGGGGGGGGGCTTTGACTAC | AKDMAPDYYDSSPKGGGFDY | TGTGCAAAAGATATGGCCCCTGACTACTATGATAGTAGCCCCAAGGGGGGGGGCTTTGACTACTGG | 66.0 | CAKDMAPDYYDSSPKGGGFDYW | 22.0 | 466.153 | 27.605 | 85.286 | 137S298M155S | 446S4N14M130S13N | 475S4N44M71S | 3.2369999999999998e-133 | 0.001296 | 1.2190000000000001e-20 | 100.0 | 100.0 | 100.0 | 138 | 435 | 1 | 298 | 447.0 | 460.0 | 5.0 | 18.0 | 476 | 519 | 5 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 486.0 | 518.0 | 426.0 | 485.0 | TGGCCCCTGAC | 11 | CCCCAAGGGGGGGGG | 15.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'M', '109 ': 'A', '110 ': 'P', '111 ': 'D', '111A': 'Y', '111B': 'Y', '111C': 'D', '112D': 'S', '112C': 'S', '112B': 'P', '112A': 'K', '112 ': 'G', '113 ': 'G', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTCTAGCGC-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ1*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNCPWTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGCCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNCP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGCGTAGCAACTGCCCGTGGACG | QQRSNCPWT | TGTCAGCAGCGTAGCAACTGCCCGTGGACGTTC | 33.0 | CQQRSNCPWTF | 11.0 | 441.224 | null | 73.749 | 107S284M174S3N | null | 391S38M136S | 9.942e-126 | null | 3.465e-17 | 99.648 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 392 | 429 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'C', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTGAGGGTT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGTTCCCCGGGGAGCTACTCCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD1-26*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGTTCCCCGGGGAGCTACTCCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNGGGAGCTACTNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKAFPGELLLFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXELLXFDYWGQGTLVTVSS | 1 | 295 | 305.0 | 314.0 | 319 | 361 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GGGAGCTACT | ELL | GGGAGCTACT | ELL | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGCGTTCCCCGGGGAGCTACTCCTTTTTGACTAC | AKAFPGELLLFDY | TGTGCGAAAGCGTTCCCCGGGGAGCTACTCCTTTTTGACTACTGG | 45.0 | CAKAFPGELLLFDYW | 15.0 | 461.479 | 19.914 | 83.363 | 136S295M137S1N | 440S8N10M118S2N | 454S5N43M71S | 7.987000000000001e-132 | 0.2575 | 4.4470000000000005e-20 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 441.0 | 450.0 | 9.0 | 18.0 | 455 | 497 | 6 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | CGTTCCCCG | 9 | CCTT | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'A', '108 ': 'F', '109 ': 'P', '110 ': 'G', '111 ': 'E', '112 ': 'L', '113 ': 'L', '114 ': 'L', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTGAGGGTT-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPTFGQGTKVEIK | 1 | 287 | null | null | 288 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCTCCGACG | QQYNSYSPT | TGCCAACAGTATAATAGTTATTCTCCGACGTTC | 33.0 | CQQYNSYSPTF | 11.0 | 449.014 | null | 67.981 | 93S287M171S | null | 380S3N35M136S | 4.3730000000000004e-128 | null | 1.84e-15 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 381 | 415 | 4 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTGTAACGG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACCGAATTTTTTACTATGATAGTAGTGGCGAGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACCGAATTTTTTACTATGATAGTAGTGGCGAGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNNNNNNTTACTATGATAGTAGTGGNNNNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANRIFYYDSSGEGYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXYYDSSGXXYWGQGTLVTVSS | 1 | 293 | 303.0 | 320.0 | 328 | 364 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | TTACTATGATAGTAGTGG | YYDSSG | TTACTATGATAGTAGTGG | YYDSSG | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAACCGAATTTTTTACTATGATAGTAGTGGCGAGGGGTAC | ANRIFYYDSSGEGY | TGTGCGAACCGAATTTTTTACTATGATAGTAGTGGCGAGGGGTACTGG | 48.0 | CANRIFYYDSSGEGYW | 16.0 | 458.363 | 35.296 | 71.827 | 136S293M142S3N | 438S3N18M115S10N | 463S11N37M71S | 6.964000000000005e-131 | 6.065e-06 | 1.328e-16 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 439.0 | 456.0 | 4.0 | 21.0 | 464 | 500 | 12 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 467.0 | 499.0 | 425.0 | 466.0 | CCGAATTTT | 9 | CGAGGGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'R', '108 ': 'I', '109 ': 'F', '110 ': 'Y', '111 ': 'Y', '112A': 'D', '112 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'E', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTGTAACGG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCCTAACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-12*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCCTAACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCNNNNACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGPGTKVDIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPXTFGPGTKVDIK | 1 | 284 | null | null | 289 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGGCTAACAGTTTCCCCCTAACT | QQANSFPLT | TGTCAACAGGCTAACAGTTTCCCCCTAACTTTC | 33.0 | CQQANSFPLTF | 11.0 | 444.34 | null | 66.059 | 93S284M174S3N | null | 381S4N34M136S | 1.117e-126 | null | 6.977e-15 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 382 | 415 | 5 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | CCTA | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGGTGTATGGG-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTCCGGGGCTTAGGGGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTCCGGGGCTTAGGGGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGNNCGGGGNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVRGLGEFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXRGXXXFDYWGQGTLVTVSS | 1 | 295 | 298.0 | 302.0 | 313 | 355 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CGGGG | RG | CGGGG | RG | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGTCCGGGGCTTAGGGGAATTTGACTAC | AKVRGLGEFDY | TGTGCGAAAGTCCGGGGCTTAGGGGAATTTGACTACTGG | 39.0 | CAKVRGLGEFDYW | 13.0 | 461.479 | 10.301 | 83.363 | 137S295M131S1N | 434S14N5M124S12N | 449S5N43M71S | 7.913000000000001e-132 | 199.9 | 4.4070000000000004e-20 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 435.0 | 439.0 | 15.0 | 19.0 | 450 | 492 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 459.0 | 491.0 | 426.0 | 458.0 | TC | 2 | CTTAGGGGAA | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'R', '109 ': 'G', '110 ': 'L', '113 ': 'G', '114 ': 'E', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGGTGTATGGG-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSLFTFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSXFTFGPGTKVDIK | 1 | 279 | null | null | 282 | 319 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNS | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNS | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTCTATTCACT | QQLNSLFT | TGTCAACAGCTTAATAGTCTATTCACTTTC | 30.0 | CQQLNSLFTF | 10.0 | 436.549 | null | 73.749 | 86S279M176S8N | null | 367S38M136S | 2.4250000000000003e-124 | null | 3.314e-17 | 100.0 | null | 100.0 | 87 | 365 | 1 | 279 | null | null | null | null | 368 | 405 | 1 | 38 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 375.0 | 404.0 | 351.0 | 374.0 | CT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '114 ': 'S', '115 ': 'L', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGTCAGAAATG-1_contig_1 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCCCCGTATTACGATTTTTGGAGTGGTCCCGATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCCCCGTATTACGATTTTTGGAGTGGTCCCGATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNGTATTACGATTTTTGGAGTGGTNNNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARAPYYDFWSGPDYYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXYYDFWSGXXYYYYYGMDVWGQGTTVTVSS | 1 | 298 | 303.0 | 324.0 | 329 | 390 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATTACGATTTTTGGAGTGGT | YYDFWSG | GTATTACGATTTTTGGAGTGGT | YYDFWSG | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGCCCCGTATTACGATTTTTGGAGTGGTCCCGATTACTACTACTACTACGGTATGGACGTC | ARAPYYDFWSGPDYYYYYGMDV | TGTGCGAGAGCCCCGTATTACGATTTTTGGAGTGGTCCCGATTACTACTACTACTACGGTATGGACGTCTGG | 72.0 | CARAPYYDFWSGPDYYYYYGMDVW | 24.0 | 466.153 | 42.986 | 119.894 | 119S298M164S1N | 421S22M138S9N | 447S62M72S | 3.1859999999999998e-133 | 2.988e-08 | 4.583000000000001e-31 | 100.0 | 100.0 | 100.0 | 120 | 417 | 1 | 298 | 422.0 | 443.0 | 1.0 | 22.0 | 448 | 509 | 1 | 62 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 477.0 | 509.0 | 411.0 | 476.0 | CCCC | 4 | CCCG | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'P', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '111A': 'F', '111B': 'W', '111C': 'S', '111D': 'G', '112E': 'P', '112D': 'D', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGTCAGAAATG-1_contig_2 | GATCAGGACTTCTCAGTTCATCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2D-29*01 | null | IGKJ4*01 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPLTFGGGTKVEIK | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPLTFGGGTKVEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGT | DIVMTQTPLSLSVTPGQPASISCKSS | CAGAGCCTCCTGCATAGTGATGGAAAGACCTAT | QSLLHSDGKTY | TTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTAT | LYWYLQKPGQPPQLLIY | GAAGTTTCC | EVS | AACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAAGTATACAGCTTCCGCTCACT | MQSIQLPLT | TGCATGCAAAGTATACAGCTTCCGCTCACTTTC | 33.0 | CMQSIQLPLTF | 11.0 | 467.712 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 1.052e-133 | null | 3.452e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'K', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'S', '108 ': 'I', '109 ': 'Q', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGTCGGTCCGA-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGACCTACGGTGATAATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD4-17*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGACCTACGGTGATAATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGANCTACGGTGANNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCATYGDNDAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAXYGXXDAFDIWGQGTMVTVSS | 1 | 292 | 294.0 | 302.0 | 306 | 355 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | CTACGGTGA | YG | CTACGGTGA | YG | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGACCTACGGTGATAATGATGCTTTTGATATC | ATYGDNDAFDI | TGTGCGACCTACGGTGATAATGATGCTTTTGATATCTGG | 39.0 | CATYGDNDAFDIW | 13.0 | 456.805 | 17.992 | 96.822 | 136S292M134S4N | 429S3N9M124S4N | 441S50M71S | 2.017e-130 | 0.9658 | 3.907e-24 | 100.0 | 100.0 | 100.0 | 137 | 428 | 1 | 292 | 430.0 | 438.0 | 4.0 | 12.0 | 442 | 491 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 458.0 | 490.0 | 425.0 | 457.0 | C | 1 | TAA | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'Y', '108 ': 'G', '109 ': 'D', '110 ': 'N', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGTCGGTCCGA-1_contig_2 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTTTCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ3*02 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTTTCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCNNNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDLSWVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXXWVFGGGTKLTVL | 1 | 286 | null | null | 291 | 328 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCTTTCTTGGGTG | QVWDSSSDLSWV | TGTCAGGTGTGGGATAGTAGTAGTGATCTTTCTTGGGTGTTC | 42.0 | CQVWDSSSDLSWVF | 14.0 | 447.456 | null | 73.749 | 191S286M253S4N | null | 481S38M211S | 1.72e-127 | null | 4.496e-17 | 100.0 | null | 100.0 | 192 | 477 | 1 | 286 | null | null | null | null | 482 | 519 | 1 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 489.0 | 518.0 | 453.0 | 488.0 | TTTC | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'S', '113 ': 'D', '114 ': 'L', '115 ': 'S', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGTCTAGCACA-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGACGGTAAAGTGGGAGCTACCAATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD1-26*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGACGGTAAAGTGGGAGCTACCAATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNGGTATAGTGGGAGCTACNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREDGKVGATNYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXGIVGATXYYYYYGMDVWGQGTTVTVSS | 1 | 296 | 301.0 | 317.0 | 320 | 381 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GGTAAAGTGGGAGCTAC | GKVGAT | GGTATAGTGGGAGCTAC | GIVGAT | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGGACGGTAAAGTGGGAGCTACCAATTACTACTACTACTACGGTATGGACGTC | AREDGKVGATNYYYYYGMDV | TGTGCGAGAGAGGACGGTAAAGTGGGAGCTACCAATTACTACTACTACTACGGTATGGACGTCTGG | 66.0 | CAREDGKVGATNYYYYYGMDVW | 22.0 | 463.037 | 27.605 | 119.894 | 137S296M157S | 437S17M136S3N | 456S62M72S | 2.807e-132 | 0.001296 | 4.655e-31 | 100.0 | 94.118 | 100.0 | 138 | 433 | 1 | 296 | 438.0 | 454.0 | 1.0 | 17.0 | 457 | 518 | 1 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 486.0 | 518.0 | 426.0 | 485.0 | GGAC | 4 | CA | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'D', '109 ': 'G', '110 ': 'K', '111 ': 'V', '111A': 'G', '111B': 'A', '111C': 'T', '112D': 'N', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGTCTAGCACA-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACNGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 281 | null | null | 283 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCAC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCAC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACCGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACCGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 439.666 | null | 71.827 | 94S281M249S4N | null | 376S1N37M211S | 3.2319999999999997e-125 | null | 1.453e-16 | 100.0 | null | 100.0 | 95 | 375 | 1 | 281 | null | null | null | null | 377 | 413 | 2 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | C | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACCTGTCTGTTTGT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATGTGCAGCAGCAGCTGGTGGGCCCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD6-13*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATGTGCAGCAGCAGCTGGTGGGCCCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNAGCAGCAGCTGGTNNNNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDVQQQLVGPLYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXQQLVXXXYYYYGMDVWGQGTTVTVSS | 1 | 302 | 308.0 | 320.0 | 330 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | AGCAGCAGCTGGT | QQLV | AGCAGCAGCTGGT | QQLV | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGATGTGCAGCAGCAGCTGGTGGGCCCCCTCTACTACTACTACGGTATGGACGTC | TTDVQQQLVGPLYYYYGMDV | TGTACCACAGATGTGCAGCAGCAGCTGGTGGGCCCCCTCTACTACTACTACGGTATGGACGTCTGG | 66.0 | CTTDVQQQLVGPLYYYYGMDVW | 22.0 | 472.386 | 25.682 | 112.203 | 137S302M157S | 444S6N13M139S2N | 466S4N58M72S | 4.3519999999999996e-135 | 0.004963 | 9.717999999999999e-29 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 445.0 | 457.0 | 7.0 | 19.0 | 467 | 524 | 5 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | TGTGC | 5 | GGGCCCCCT | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'V', '109 ': 'Q', '110 ': 'Q', '111 ': 'Q', '111A': 'L', '111B': 'V', '111C': 'G', '112D': 'P', '112C': 'L', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACCTGTCTGTTTGT-1_contig_1 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGCACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGCACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCNNACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPHTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPXTFGQGTKLEIK | 1 | 299 | null | null | 302 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACTCCGCACACT | MQALQTPHT | TGCATGCAAGCTCTACAAACTCCGCACACTTTT | 33.0 | CMQALQTPHTF | 11.0 | 467.712 | null | 69.904 | 90S299M174S3N | null | 391S3N36M136S | 1.052e-133 | null | 4.962e-16 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 392 | 427 | 4 | 39 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | GC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'H', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGAGAAACCGC-1_contig_2 | TGGGGACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGGGGGGTGTACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD2-8*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGGGGGGTGTACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGVYSWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGVYYWGQGTLVTVSS | 1 | 296 | 297.0 | 301.0 | 302 | 340 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGGGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | GGTGT | V | GGTGT | V | ACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | SWGQGTLVTVSS | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGGGGTGTACTCC | ARGVYS | TGTGCGAGGGGGGTGTACTCCTGG | 24.0 | CARGVYSW | 8.0 | 459.921 | 10.301 | 69.904 | 117S296M115S | 413S16N5M110S10N | 418S9N39M71S | 2.178e-131 | 187.3 | 4.647e-16 | 99.662 | 100.0 | 97.436 | 118 | 413 | 1 | 296 | 414.0 | 418.0 | 17.0 | 21.0 | 419 | 457 | 10 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 424.0 | 456.0 | 406.0 | 423.0 | null | 0 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '115 ': 'V', '116 ': 'Y', '117 ': 'S'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGAGAAACCGC-1_contig_1 | GGAGGAGTCAGACCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-6*01 | null | IGKJ2*01 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPYTFGQGTKLEIK | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | AIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LGWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CTACAAGATTACAATTACCCGTACACT | LQDYNYPYT | TGTCTACAAGATTACAATTACCCGTACACTTTT | 33.0 | CLQDYNYPYTF | 11.0 | 444.34 | null | 73.749 | 95S284M174S3N | null | 379S1N38M136S | 1.121e-126 | null | 3.39e-17 | 100.0 | null | 100.0 | 96 | 379 | 1 | 284 | null | null | null | null | 380 | 417 | 2 | 39 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'D', '108 ': 'Y', '109 ': 'N', '114 ': 'Y', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGAGGGCTTCC-1_contig_2 | AGCTCTGGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCAGTGATCTGCACTGAACACAGAGGACTCGCCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGCGTATAGCAGCAGCTGGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-66*02 | IGHD6-13*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGCGTATAGCAGCAGCTGGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGANNNNNGTATAGCAGCAGCTGGNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREAYSSSWDDAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXYSSSWXDAFDIWGQGTMVTVSS | 1 | 291 | 297.0 | 312.0 | 315 | 364 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTATAGCAGCAGCTGG | YSSSW | GTATAGCAGCAGCTGG | YSSSW | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGGCGTATAGCAGCAGCTGGGATGATGCTTTTGATATC | AREAYSSSWDDAFDI | TGTGCGAGAGAGGCGTATAGCAGCAGCTGGGATGATGCTTTTGATATCTGG | 51.0 | CAREAYSSSWDDAFDIW | 17.0 | 455.247 | 31.45 | 96.822 | 136S291M144S | 432S2N16M123S3N | 450S50M71S | 6.039e-130 | 8.718e-05 | 3.9709999999999996e-24 | 100.0 | 100.0 | 100.0 | 137 | 427 | 1 | 291 | 433.0 | 448.0 | 3.0 | 18.0 | 451 | 500 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 307 | 308 | 421 | 467.0 | 499.0 | 422.0 | 466.0 | GAGGC | 5 | GA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'A', '109 ': 'Y', '110 ': 'S', '111 ': 'S', '111A': 'S', '112A': 'W', '112 ': 'D', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGAGGGCTTCC-1_contig_1 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTAGGAGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ2*01 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTAGGAGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTNNNNGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHLGVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHLXVFGGGTKLTVL | 1 | 290 | null | null | 295 | 328 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHL | null | null | null | null | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATCTAGGAGTA | NSRDSSGNHLGV | TGTAACTCCCGGGACAGCAGTGGTAACCATCTAGGAGTATTC | 42.0 | CNSRDSSGNHLGVF | 14.0 | 453.689 | null | 66.059 | 97S290M249S | null | 391S4N34M211S | 1.98e-129 | null | 8.075e-15 | 100.0 | null | 100.0 | 98 | 387 | 1 | 290 | null | null | null | null | 392 | 425 | 5 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 395.0 | 424.0 | 359.0 | 394.0 | AGGA | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'G', '113 ': 'N', '114 ': 'H', '115 ': 'L', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGAGGGTGTGT-1_contig_2 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGTCGTGGGATGGCTACAATAGTTGATCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGTCGTGGGATGGCTACAATAGTTGATCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNTGGCTACNNNNNNNNNNNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRGMATIVDHWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXATXXXXWGQGTLVTVSS | 1 | 298 | 308.0 | 314.0 | 326 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGGCTAC | AT | TGGCTAC | AT | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGTCGTGGGATGGCTACAATAGTTGATCAC | ARGRGMATIVDH | TGTGCGAGAGGTCGTGGGATGGCTACAATAGTTGATCACTGG | 42.0 | CARGRGMATIVDHW | 14.0 | 466.153 | 14.146 | 69.904 | 92S298M134S1N | 399S10N7M118S6N | 417S12N36M71S | 2.873e-133 | 12.93 | 4.611e-16 | 100.0 | 100.0 | 100.0 | 93 | 390 | 1 | 298 | 400.0 | 406.0 | 11.0 | 17.0 | 418 | 453 | 13 | 48 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 420.0 | 452.0 | 384.0 | 419.0 | GTCGTGGGA | 9 | AATAGTTGATC | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'G', '110 ': 'M', '112 ': 'A', '113 ': 'T', '114 ': 'I', '115 ': 'V', '116 ': 'D', '117 ': 'H'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGAGGGTGTGT-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACACCAGGGTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACACCAGGGTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACANNNNNNTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQHQGFGPGTKVDIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQXXXFGPGTKVDIK | 1 | 269 | null | null | 276 | 307 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACA | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQ | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACA | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQ | null | null | null | null | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACACCAGGGT | QHQG | TGCCAACACCAGGGTTTC | 18.0 | CQHQGF | 6.0 | 420.968 | null | 62.213 | 93S269M174S18N | null | 368S6N32M136S | 1.177e-119 | null | 9.75e-14 | 100.0 | null | 100.0 | 94 | 362 | 1 | 269 | null | null | null | null | 369 | 400 | 7 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 370.0 | 399.0 | 358.0 | 369.0 | CCAGGG | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'H', '116 ': 'Q', '117 ': 'G'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGAGTTAAGTG-1_contig_1 | TGGGATCACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAAGGGCGGGCGGATACAGCTATGGTTACTGGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAAGGGCGGGCGGATACAGCTATGGTTACTGGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGNNNNNNNNNNGGATACAGCTATGGTTACNNNNNCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGRAGGYSYGYWGYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGXXXGYSYGYXXYWGQGTLVTVSS | 1 | 296 | 307.0 | 324.0 | 330 | 367 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | GGATACAGCTATGGTTAC | GYSYGY | GGATACAGCTATGGTTAC | GYSYGY | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAAGGGCGGGCGGATACAGCTATGGTTACTGGGGCTAC | ARGRAGGYSYGYWGY | TGTGCGAGAGGAAGGGCGGGCGGATACAGCTATGGTTACTGGGGCTACTGG | 51.0 | CARGRAGGYSYGYWGYW | 17.0 | 463.037 | 35.296 | 73.749 | 119S296M142S | 425S2N18M114S | 448S10N38M71S | 2.657e-132 | 5.914e-06 | 3.415e-17 | 100.0 | 100.0 | 100.0 | 120 | 415 | 1 | 296 | 426.0 | 443.0 | 3.0 | 20.0 | 449 | 486 | 11 | 48 | 120 | 194 | 195 | 218 | 219 | 269 | 270 | 293 | 294 | 407 | 453.0 | 485.0 | 408.0 | 452.0 | AAGGGCGGGC | 10 | TGGGG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'A', '110 ': 'G', '111 ': 'G', '111A': 'Y', '112A': 'S', '112 ': 'Y', '113 ': 'G', '114 ': 'Y', '115 ': 'W', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGAGTTAAGTG-1_contig_2 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ2*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLYTFGQGTKLEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLYTFGQGTKLEIK | 1 | 304 | null | null | 305 | 343 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAATATTATAGTACTCCTCTGTACACT | QQYYSTPLYT | TGTCAGCAATATTATAGTACTCCTCTGTACACTTTT | 36.0 | CQQYYSTPLYTF | 12.0 | 475.502 | null | 75.672 | 90S304M175S1N | null | 394S39M136S | 4.8069999999999996e-136 | null | 9.204e-18 | 100.0 | null | 100.0 | 91 | 394 | 1 | 304 | null | null | null | null | 395 | 433 | 1 | 39 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 403.0 | 432.0 | 373.0 | 402.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'P', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCAAAGGTGC-1_contig_1 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGGGGAACTGGAACTCACAGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD1-7*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGGGGAACTGGAACTCACAGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNAACTGGAACTNNNNNCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGTGTHSPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXTGTXXPWGQGTLVTVSS | 1 | 295 | 300.0 | 309.0 | 315 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | AACTGGAACT | TGT | AACTGGAACT | TGT | CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGGGAACTGGAACTCACAGCCCC | ARGGTGTHSP | TGTGCGAGAGGGGGAACTGGAACTCACAGCCCCTGG | 36.0 | CARGGTGTHSPW | 12.0 | 461.479 | 19.914 | 73.749 | 121S295M128S1N | 420S5N10M114S2N | 435S13N38M71S | 7.632e-132 | 0.2464 | 3.333e-17 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 421.0 | 430.0 | 6.0 | 15.0 | 436 | 473 | 14 | 51 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 440.0 | 472.0 | 410.0 | 439.0 | GGGG | 4 | CACAG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'T', '113 ': 'G', '114 ': 'T', '115 ': 'H', '116 ': 'S', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCAAAGGTGC-1_contig_2 | GAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACGTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACGTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYVWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYXWTFGQGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSY | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSY | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAGCATAATAGTTACGTGTGGACG | LQHNSYVWT | TGTCTACAGCATAATAGTTACGTGTGGACGTTC | 33.0 | CLQHNSYVWTF | 11.0 | 441.224 | null | 73.749 | 94S282M176S5N | null | 378S38M136S | 9.701e-126 | null | 3.383e-17 | 100.0 | null | 100.0 | 95 | 376 | 1 | 282 | null | null | null | null | 379 | 416 | 1 | 38 | 95 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 386.0 | 415.0 | 359.0 | 385.0 | GT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'V', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCAAGAGGCT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGGATCCCAATCCGTGGATACAGCTATGGTTACTTTGGCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-18*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGGATCCCAATCCGTGGATACAGCTATGGTTACTTTGGCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNNNNNNNNGTGGATACAGCTATGGTTACNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDRIPIRGYSYGYFGYYFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXGYSYGYXXXYFDYWGQGTLVTVSS | 1 | 296 | 311.0 | 330.0 | 338 | 385 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTGGATACAGCTATGGTTAC | GYSYGY | GTGGATACAGCTATGGTTAC | GYSYGY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATCGGATCCCAATCCGTGGATACAGCTATGGTTACTTTGGCTACTACTTTGACTAC | AKDRIPIRGYSYGYFGYYFDY | TGTGCGAAAGATCGGATCCCAATCCGTGGATACAGCTATGGTTACTTTGGCTACTACTTTGACTACTGG | 69.0 | CAKDRIPIRGYSYGYFGYYFDYW | 23.0 | 463.037 | 39.141 | 92.976 | 136S296M160S | 446S20M126S | 473S48M71S | 2.817e-132 | 4.378e-07 | 5.922e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 447.0 | 466.0 | 1.0 | 20.0 | 474 | 521 | 1 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | TCGGATCCCAATCC | 14 | TTTGGCT | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'R', '109 ': 'I', '110 ': 'P', '111 ': 'I', '111A': 'R', '111B': 'G', '111C': 'Y', '111D': 'S', '112D': 'Y', '112C': 'G', '112B': 'Y', '112A': 'F', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCAAGAGGCT-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ2*02 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTGCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPWTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPCTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | GTGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | WTFGQGTKLEIK | GTGCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | CTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATGATAATCTCCCGTGGACT | QQYDNLPWT | TGTCAACAGTATGATAATCTCCCGTGGACTTTT | 33.0 | CQQYDNLPWTF | 11.0 | 444.34 | null | 67.981 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 1.854e-15 | 100.0 | null | 97.368 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCAATACGCT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGGATACAGCTATGGTACCCATCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD5-18*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGGATACAGCTATGGTACCCATCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNGGATACAGCTATGGTNNNNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGQDTAMVPILYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXDTAMVXXXYYYYGMDVWGQGTTVTVSS | 1 | 295 | 300.0 | 314.0 | 324 | 381 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GGATACAGCTATGGT | DTAMV | GGATACAGCTATGGT | DTAMV | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGGCAGGATACAGCTATGGTACCCATCCTCTACTACTACTACGGTATGGACGTC | ARGQDTAMVPILYYYYGMDV | TGTGCGAGAGGGCAGGATACAGCTATGGTACCCATCCTCTACTACTACTACGGTATGGACGTCTGG | 66.0 | CARGQDTAMVPILYYYYGMDVW | 22.0 | 461.479 | 29.528 | 112.203 | 124S295M158S1N | 423S2N15M139S3N | 447S4N58M72S | 8.075e-132 | 0.0003341 | 9.401999999999999e-29 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 424.0 | 438.0 | 3.0 | 17.0 | 448 | 505 | 5 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 473.0 | 505.0 | 413.0 | 472.0 | GGCA | 4 | ACCCATCCT | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'Q', '109 ': 'D', '110 ': 'T', '111 ': 'A', '111A': 'M', '111B': 'V', '111C': 'P', '112D': 'I', '112C': 'L', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCAATACGCT-1_contig_1 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCAAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCAAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCNNGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGQVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXVFGGGTKLTVL | 1 | 295 | null | null | 298 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGTCAAGTG | AAWDDSLSGQV | TGTGCAGCATGGGATGACAGCCTGAGTGGTCAAGTGTTC | 39.0 | CAAWDDSLSGQVF | 13.0 | 461.479 | null | 66.059 | 103S295M247S1N | null | 400S4N34M211S | 9.077e-132 | null | 8.192e-15 | 100.0 | null | 100.0 | 104 | 398 | 1 | 295 | null | null | null | null | 401 | 434 | 5 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 404.0 | 433.0 | 371.0 | 403.0 | AA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'Q', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCACGGTTTA-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCGCGGTGACCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD4-17*01 | IGHJ6*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCGCGGTGACCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNCGGTGACCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGAVTYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXVTYYGMDVWGQGTTVTVSS | 1 | 295 | 299.0 | 305.0 | 306 | 357 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CGGTGAC | VT | CGGTGAC | VT | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGCGCGGTGACCTACTACGGTATGGACGTC | ARGAVTYYGMDV | TGTGCGAGAGGCGCGGTGACCTACTACGGTATGGACGTCTGG | 42.0 | CARGAVTYYGMDVW | 14.0 | 461.479 | 14.146 | 100.667 | 116S295M134S1N | 414S6N7M124S3N | 421S10N52M72S | 7.647e-132 | 13.46 | 2.634e-25 | 100.0 | 100.0 | 100.0 | 117 | 411 | 1 | 295 | 415.0 | 421.0 | 7.0 | 13.0 | 422 | 473 | 11 | 62 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 441.0 | 473.0 | 405.0 | 440.0 | GCG | 3 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'A', '109 ': 'V', '110 ': 'T', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCACGGTTTA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYXWTFGQGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATCCGTGGACG | QQYNSYPWT | TGCCAACAGTATAATAGTTATCCGTGGACGTTC | 33.0 | CQQYNSYPWTF | 11.0 | 441.224 | null | 73.749 | 93S282M176S5N | null | 377S38M136S | 9.683e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 375 | 1 | 282 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | CC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCAGTAAGCG-1_contig_2 | GGGGACTTTCTGAGAGTCCTGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCTCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCTATTACTATGATAGTAGTGGTTACCGATTGGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*02 | IGHD3-22*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCTATTACTATGATAGTAGTGGTTACCGATTGGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGNTATTACTATGATAGTAGTGGTTANNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCASYYYDSSGYRLGDAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAXYYYDSSGXXXXDAFDIWGQGTMVTVSS | 1 | 293 | 295.0 | 317.0 | 327 | 376 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCA | TATTACTATGATAGTAGTGGTTA | YYYDSSG | TATTACTATGATAGTAGTGGTTA | YYYDSSG | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCT | QVQLQESGPGLVKPSGTLSLTCAVS | GGTGGCTCCATCAGCAGTAGTAACTGG | GGSISSSNW | TGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWVRQPPGKGLEWIGE | ATCTATCATAGTGGGAGCACC | IYHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGCTATTACTATGATAGTAGTGGTTACCGATTGGGTGATGCTTTTGATATC | ASYYYDSSGYRLGDAFDI | TGTGCGAGCTATTACTATGATAGTAGTGGTTACCGATTGGGTGATGCTTTTGATATCTGG | 60.0 | CASYYYDSSGYRLGDAFDIW | 20.0 | 458.363 | 44.909 | 96.822 | 96S293M154S3N | 390S1N23M130S7N | 422S50M71S | 6.605000000000005e-131 | 7.357e-09 | 3.7719999999999996e-24 | 100.0 | 100.0 | 100.0 | 97 | 389 | 1 | 293 | 391.0 | 413.0 | 2.0 | 24.0 | 423 | 472 | 1 | 50 | 97 | 171 | 172 | 198 | 199 | 249 | 250 | 270 | 271 | 384 | 439.0 | 471.0 | 385.0 | 438.0 | C | 1 | CCGATTGGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'G', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'W'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'Y', '108 ': 'Y', '109 ': 'Y', '110 ': 'D', '111 ': 'S', '111A': 'S', '111B': 'G', '112C': 'Y', '112B': 'R', '112A': 'L', '112 ': 'G', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCAGTAAGCG-1_contig_1 | AGGAATCAGACCCAGTCAGGACACAGCATGGACATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-16*02 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTAT | LAWFQQKPGKAPKSLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGC | SLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATAATAGTTACCCTCTCACT | QQYNSYPLT | TGCCAACAGTATAATAGTTACCCTCTCACTTTC | 33.0 | CQQYNSYPLTF | 11.0 | 447.456 | null | 69.904 | 93S286M172S1N | null | 379S2N36M136S | 1.288e-127 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 380 | 415 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'S', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'K', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCATGGTTGT-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGTCGGATATTGTAGTAGTACCAGCTGAACGACACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-2*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGTCGGATATTGTAGTAGTACCAGCTGAACGACACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNGGATATTGTAGTAGTACCAGCTGNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVSDIVVVPAERHFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXDIVVVPAXXXFDYWGQGTLVTVSS | 1 | 295 | 300.0 | 322.0 | 329 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GGATATTGTAGTAGTACCAGCTG | DIVVVPA | GGATATTGTAGTAGTACCAGCTG | DIVVVPA | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTGTCGGATATTGTAGTAGTACCAGCTGAACGACACTTTGACTAC | ARVSDIVVVPAERHFDY | TGTGCGAGAGTGTCGGATATTGTAGTAGTACCAGCTGAACGACACTTTGACTACTGG | 57.0 | CARVSDIVVVPAERHFDYW | 19.0 | 461.479 | 44.909 | 87.208 | 136S295M149S1N | 435S1N23M122S7N | 464S3N45M71S | 8.119000000000001e-132 | 7.867e-09 | 3.160000000000001e-21 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 436.0 | 458.0 | 2.0 | 24.0 | 465 | 509 | 4 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | TGTC | 4 | AACGAC | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'S', '109 ': 'D', '110 ': 'I', '111 ': 'V', '111A': 'V', '111B': 'V', '112B': 'P', '112A': 'A', '112 ': 'E', '113 ': 'R', '114 ': 'H', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCATGGTTGT-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTTCTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTTCTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTNNTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTFFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTXFGGGTKLTVL | 1 | 286 | null | null | 289 | 319 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | null | null | null | null | TTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTTC | QSADSSGTF | TGTCAATCAGCAGACAGCAGTGGTACTTTCTTC | 33.0 | CQSADSSGTFF | 11.0 | 447.456 | null | 60.291 | 100S286M244S4N | null | 388S7N31M211S | 1.4739999999999999e-127 | null | 4.358e-13 | 100.0 | null | 100.0 | 101 | 386 | 1 | 286 | null | null | null | null | 389 | 419 | 8 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | TC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'G', '116 ': 'T', '117 ': 'F'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGCATTGCGGC-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGTGTGGTGGTGACTGCTATTACTTGGATAGAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-21*02 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGTGTGGTGGTGACTGCTATTACTTGGATAGAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANTGTGGTGGTGACTGCTATTNNNNNNNNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARECGGDCYYLDRDAFDIWGQGTMVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXCGGDCYXXXXDAFDIWGQGTMVTVSS | 1 | 296 | 298.0 | 316.0 | 328 | 376 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGTGGTGGTGACTGCTATT | CGGDCY | TGTGGTGGTGACTGCTATT | CGGDCY | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGTGTGGTGGTGACTGCTATTACTTGGATAGAGATGCTTTTGATATC | ARECGGDCYYLDRDAFDI | TGTGCGAGAGAGTGTGGTGGTGACTGCTATTACTTGGATAGAGATGCTTTTGATATCTGG | 60.0 | CARECGGDCYYLDRDAFDIW | 20.0 | 463.037 | 37.218 | 94.899 | 136S296M151S | 433S7N19M131S2N | 463S1N49M71S | 2.772e-132 | 1.634e-06 | 1.5379999999999998e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 434.0 | 452.0 | 8.0 | 26.0 | 464 | 512 | 2 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 479.0 | 511.0 | 425.0 | 478.0 | G | 1 | ACTTGGATAGA | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'C', '109 ': 'G', '110 ': 'G', '111 ': 'D', '111A': 'C', '111B': 'Y', '112C': 'Y', '112B': 'L', '112A': 'D', '112 ': 'R', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGCATTGCGGC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-12*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPYTFGQGTKLEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGGCTAACAGTTTCCCGTACACT | QQANSFPYT | TGTCAACAGGCTAACAGTTTCCCGTACACTTTT | 33.0 | CQQANSFPYTF | 11.0 | 444.34 | null | 73.749 | 93S284M174S3N | null | 377S1N38M136S | 1.117e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 378 | 415 | 2 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGGTCAAAGCG-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAATTGTGGGAGCTACTATGAGGGAGAGGGGGGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*01 | IGHD1-26*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAATTGTGGGAGCTACTATGAGGGAGAGGGGGGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGANNNGTGGGAGCTACTANNNNNNNNNNNNNNNNTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARIVGATMRERGVFDIWGQGTMVTVSS | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXVGATXXXXXXFDIWGQGTMVTVSS | 1 | 291 | 295.0 | 307.0 | 324 | 367 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTGGGAGCTACTA | VGAT | GTGGGAGCTACTA | VGAT | TTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | FDIWGQGTMVTVSS | TTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | FDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLIQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAATTGTGGGAGCTACTATGAGGGAGAGGGGGGTTTTTGATATC | ARIVGATMRERGVFDI | TGTGCGAGAATTGTGGGAGCTACTATGAGGGAGAGGGGGGTTTTTGATATCTGG | 54.0 | CARIVGATMRERGVFDIW | 18.0 | 455.247 | 25.682 | 85.286 | 130S291M147S2N | 424S6N13M131S1N | 453S6N44M71S | 6.006e-130 | 0.004726 | 1.173e-20 | 100.0 | 100.0 | 100.0 | 131 | 421 | 1 | 291 | 425.0 | 437.0 | 7.0 | 19.0 | 454 | 497 | 7 | 50 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 464.0 | 496.0 | 416.0 | 463.0 | ATT | 3 | TGAGGGAGAGGGGGGT | 16.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'I', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'I', '108 ': 'V', '109 ': 'G', '110 ': 'A', '111 ': 'T', '111A': 'M', '112B': 'R', '112A': 'E', '112 ': 'R', '113 ': 'G', '114 ': 'V', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGGTCAAAGCG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSYTFGQGTKLEIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATTCTTACACT | QQYNSYSYT | TGCCAACAGTATAATAGTTATTCTTACACTTTT | 33.0 | CQQYNSYSYTF | 11.0 | 445.898 | null | 71.827 | 93S285M173S2N | null | 378S2N37M136S | 3.792e-127 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 378 | 1 | 285 | null | null | null | null | 379 | 415 | 3 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGGTCAATACC-1_contig_1 | ATCACATAACAACCAGATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATCTATGATAGTAGTGGTGCTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*02 | IGHD3-22*01 | IGHJ4*02 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATCTATGATAGTAGTGGTGCTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNCTATGATAGTAGTGGTNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVIYDSSGALDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARXXYDSSGXXDYWGQGTLVTVSS | 1 | 294 | 300.0 | 315.0 | 322 | 361 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAR | CTATGATAGTAGTGGT | YDSSG | CTATGATAGTAGTGGT | YDSSG | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATACT | GGTFSSYT | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGG | ISWVRQAPGQGLEWMGR | ATCATCCCTATCCTTGGTATAGCA | IIPILGIA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTGATCTATGATAGTAGTGGTGCTCTCGACTAC | ARVIYDSSGALDY | TGTGCGAGAGTGATCTATGATAGTAGTGGTGCTCTCGACTACTGG | 45.0 | CARVIYDSSGALDYW | 15.0 | 459.921 | 31.45 | 77.595 | 115S294M138S | 414S6N16M117S9N | 436S8N40M71S | 2.2610000000000003e-131 | 8.345e-05 | 2.332e-18 | 100.0 | 100.0 | 100.0 | 116 | 409 | 1 | 294 | 415.0 | 430.0 | 7.0 | 22.0 | 437 | 476 | 9 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 443.0 | 475.0 | 404.0 | 442.0 | GTGAT | 5 | GCTCTC | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'T'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'L', '63 ': 'G', '64 ': 'I', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'I', '109 ': 'Y', '110 ': 'D', '111 ': 'S', '112 ': 'S', '113 ': 'G', '114 ': 'A', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGGTCAATACC-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ1*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWTFGQGTKVEIK | 1 | 282 | null | null | 283 | 316 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGG | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGG | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGCGTAGCAACTGGACG | QQRSNWT | TGTCAGCAGCGTAGCAACTGGACGTTC | 27.0 | CQQRSNWTF | 9.0 | 441.224 | null | 66.059 | 107S282M170S5N | null | 389S4N34M136S | 9.831e-126 | null | 7.081e-15 | 100.0 | null | 100.0 | 108 | 389 | 1 | 282 | null | null | null | null | 390 | 423 | 5 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 393.0 | 422.0 | 372.0 | 392.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '115 ': 'N', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGGTCCAGTGC-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTTGCGTATTACTATGATAGTAGTGGTTATCCCGCCCAGGTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTTGCGTATTACTATGATAGTAGTGGTTATCCCGCCCAGGTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNGTATTACTATGATAGTAGTGGTTATNNNNNNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVAYYYDSSGYPAQVYFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXYYYDSSGYXXXXYFDYWGQGTLVTVSS | 1 | 295 | 300.0 | 324.0 | 337 | 382 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | GTATTACTATGATAGTAGTGGTTAT | YYYDSSGY | GTATTACTATGATAGTAGTGGTTAT | YYYDSSGY | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTTGCGTATTACTATGATAGTAGTGGTTATCCCGCCCAGGTTTACTTTGACTAC | ARVAYYYDSSGYPAQVYFDY | TGTGCGAGAGTTGCGTATTACTATGATAGTAGTGGTTATCCCGCCCAGGTTTACTTTGACTACTGG | 66.0 | CARVAYYYDSSGYPAQVYFDYW | 22.0 | 461.479 | 48.755 | 89.131 | 115S295M158S1N | 414S25M129S6N | 451S2N46M71S | 7.987000000000001e-132 | 5.358e-10 | 8.159999999999999e-22 | 100.0 | 100.0 | 100.0 | 116 | 410 | 1 | 295 | 415.0 | 439.0 | 1.0 | 25.0 | 452 | 497 | 3 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 464.0 | 496.0 | 404.0 | 463.0 | TTGC | 4 | CCCGCCCAGGTT | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'A', '109 ': 'Y', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '111C': 'S', '112D': 'G', '112C': 'Y', '112B': 'P', '112A': 'A', '112 ': 'Q', '113 ': 'V', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGGTCCAGTGC-1_contig_2 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | 1 | 302 | null | null | 303 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCGCTCACT | QQYYSTPLT | TGTCAGCAATATTATAGTACTCCGCTCACTTTC | 33.0 | CQQYYSTPLTF | 11.0 | 472.386 | null | 73.749 | 90S302M174S3N | null | 392S38M136S | 4.145e-135 | null | 3.471e-17 | 100.0 | null | 100.0 | 91 | 392 | 1 | 302 | null | null | null | null | 393 | 430 | 1 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGGTTGAGGTG-1_contig_2 | AGCTCTGGGAGAGGAGCTCCAGCCTTGGGATTCCCAGCTGTCTCCACTCGGTGATCGGCACTGAATACAGGAGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACCTCTACATGGCTACAATTGGGGGCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-73*02 | IGHD5-12*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACCTCTACATGGCTACAATTGGGGGCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACNNNNNNNTGGCTACGATTNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTRPLHGYNWGPFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTRXXXGYDXXXFDYWGQGTLVTVSS | 1 | 301 | 309.0 | 319.0 | 328 | 370 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGAC | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGAC | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTR | TGGCTACAATT | GYN | TGGCTACGATT | GYD | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLKLSCAAS | GGGTTCACCTTCAGTGGCTCTGCT | GFTFSGSA | ATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGT | MHWVRQASGKGLEWVGR | ATTAGAAGCAAAGCTAACAGTTACGCGACA | IRSKANSYAT | GCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGT | AYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGACCTCTACATGGCTACAATTGGGGGCCGTTTGACTAC | TRPLHGYNWGPFDY | TGTACTAGACCTCTACATGGCTACAATTGGGGGCCGTTTGACTACTGG | 48.0 | CTRPLHGYNWGPFDYW | 16.0 | 470.828 | 16.069 | 83.363 | 137S301M140S1N | 445S10N11M122S2N | 464S5N43M71S | 1.241e-134 | 3.768 | 4.527e-20 | 100.0 | 90.909 | 100.0 | 138 | 438 | 1 | 301 | 446.0 | 456.0 | 11.0 | 21.0 | 465 | 507 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 474.0 | 506.0 | 432.0 | 473.0 | CTCTACA | 7 | GGGGGCCG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'K', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'S', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'S', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'N', '62 ': 'S', '63 ': 'Y', '64 ': 'A', '65 ': 'T'}, 'fwh3': {'66 ': 'A', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'P', '108 ': 'L', '109 ': 'H', '110 ': 'G', '111 ': 'Y', '112A': 'N', '112 ': 'W', '113 ': 'G', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGGTTGAGGTG-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCAGACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ3*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCAGACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCNNACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPQTFGPGTKVDIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPXTFGPGTKVDIK | 1 | 304 | null | null | 307 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAATATTATAGTACTCCTCAGACT | QQYYSTPQT | TGTCAGCAATATTATAGTACTCCTCAGACTTTC | 33.0 | CQQYYSTPQTF | 11.0 | 475.502 | null | 66.059 | 90S304M172S1N | null | 396S4N34M136S | 4.78e-136 | null | 7.171e-15 | 100.0 | null | 100.0 | 91 | 394 | 1 | 304 | null | null | null | null | 397 | 430 | 5 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | AG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Q', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGGTTTGGGCC-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGGCTGTAGTAGTACCACCTACACCGAATGGTGTACCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGGCTGTAGTAGTACCACCTACACCGAATGGTGTACCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNTGTAGTAGTACCANNNNNNNNNNNNNNNNNNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAREAVVVPPTPNGVPYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXVVVPXXXXXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 300.0 | 312.0 | 333 | 387 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | TGTAGTAGTACCA | VVVP | TGTAGTAGTACCA | VVVP | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGGCTGTAGTAGTACCACCTACACCGAATGGTGTACCCTACTACTACGGTATGGACGTC | AREAVVVPPTPNGVPYYYGMDV | TGTGCGAGAGAGGCTGTAGTAGTACCACCTACACCGAATGGTGTACCCTACTACTACGGTATGGACGTCTGG | 72.0 | CAREAVVVPPTPNGVPYYYGMDVW | 24.0 | 463.037 | 25.682 | 106.435 | 115S296M163S | 414S7N13M147S11N | 447S7N55M72S | 2.727e-132 | 0.004776 | 5.096e-27 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 415.0 | 427.0 | 8.0 | 20.0 | 448 | 502 | 8 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 470.0 | 502.0 | 404.0 | 469.0 | GGC | 3 | CCTACACCGAATGGTGTACC | 20.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'A', '109 ': 'V', '110 ': 'V', '111 ': 'V', '111A': 'P', '111B': 'P', '111C': 'T', '111D': 'P', '112E': 'N', '112D': 'G', '112C': 'V', '112B': 'P', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGGTTTGGGCC-1_contig_2 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCNNACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPRTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPXTFGQGTKVEIK | 1 | 286 | null | null | 289 | 322 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCTCGAACG | QQYNNWPRT | TGTCAGCAGTATAATAACTGGCCTCGAACGTTC | 33.0 | CQQYNNWPRTF | 11.0 | 447.456 | null | 66.059 | 104S286M172S1N | null | 392S4N34M136S | 1.315e-127 | null | 7.119e-15 | 100.0 | null | 100.0 | 105 | 390 | 1 | 286 | null | null | null | null | 393 | 426 | 5 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 396.0 | 425.0 | 369.0 | 395.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGTCAAGAAGT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAGCAAATCCGCCGGGGATACAGCTATGGTTTAGGTGTGGCTATGGCTGCGTGGGCCCCCAATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD5-18*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAGCAAATCCGCCGGGGATACAGCTATGGTTTAGGTGTGGCTATGGCTGCGTGGGCCCCCAATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNNNNGGATACAGCTATGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTEQIRRGYSYGLGVAMAAWAPNDAFDIWGQGTMVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXGYSYGXXXXXXXXXXXDAFDIWGQGTMVTVSS | 1 | 302 | 316.0 | 331.0 | 363 | 412 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GGATACAGCTATGGTT | GYSYG | GGATACAGCTATGGTT | GYSYG | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | ACCACAGAGCAAATCCGCCGGGGATACAGCTATGGTTTAGGTGTGGCTATGGCTGCGTGGGCCCCCAATGATGCTTTTGATATC | TTEQIRRGYSYGLGVAMAAWAPNDAFDI | TGTACCACAGAGCAAATCCGCCGGGGATACAGCTATGGTTTAGGTGTGGCTATGGCTGCGTGGGCCCCCAATGATGCTTTTGATATCTGG | 90.0 | CTTEQIRRGYSYGLGVAMAAWAPNDAFDIW | 30.0 | 472.386 | 31.45 | 96.822 | 137S302M181S | 452S2N16M152S2N | 499S50M71S | 4.536e-135 | 9.48e-05 | 4.318e-24 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 453.0 | 468.0 | 3.0 | 18.0 | 500 | 549 | 1 | 50 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 516.0 | 548.0 | 432.0 | 515.0 | GCAAATCCGCCGG | 13 | TAGGTGTGGCTATGGCTGCGTGGGCCCCCAA | 31.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'E', '108 ': 'Q', '109 ': 'I', '110 ': 'R', '111 ': 'R', '111A': 'G', '111B': 'Y', '111C': 'S', '111D': 'Y', '111E': 'G', '111F': 'L', '111G': 'G', '112H': 'V', '112G': 'A', '112F': 'M', '112E': 'A', '112D': 'A', '112C': 'W', '112B': 'A', '112A': 'P', '112 ': 'N', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGTCAAGAAGT-1_contig_1 | TCTGAGGATACGCGTGACAGATAAGAAGGGCTGGTGGGATCAGTCCTGGTGGTAGCTCAGGAAGCAGAGCCTGGAGCATCTCCACTATGGCCTGGGCTCCACTACTTCTCACCCTCCTCGCTCACTGCACAGGTTCTTGGGCCAATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCATCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV6-57*01 | null | IGLJ2*01 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCATCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCANNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSIYVVFGGGTKLTVL | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSXXVVFGGGTKLTVL | 1 | 292 | null | null | 297 | 334 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCA | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSS | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCA | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSS | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGC | NFMLTQPHSVSESPGKTVTISCTRS | AGTGGCAGCATTGCCAGCAACTAT | SGSIASNY | GTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTAT | VQWYQQRPGSSPTTVIY | GAGGATAAC | EDN | CAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGT | QRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCTTATGATAGCAGCATCTATGTGGTA | QSYDSSIYVV | TGTCAGTCTTATGATAGCAGCATCTATGTGGTATTC | 36.0 | CQSYDSSIYVVF | 12.0 | 456.805 | null | 73.749 | 143S292M253S4N | null | 439S38M211S | 2.479e-130 | null | 4.234e-17 | 100.0 | null | 100.0 | 144 | 435 | 1 | 292 | null | null | null | null | 440 | 477 | 1 | 38 | 144 | 218 | 219 | 242 | 243 | 293 | 294 | 302 | 303 | 416 | 447.0 | 476.0 | 417.0 | 446.0 | TCTA | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'N', '2 ': 'F', '3 ': 'M', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'H', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'K', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'R', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'A', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Q', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'S', '50 ': 'P', '51 ': 'T', '52 ': 'T', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'I', '81 ': 'D', '82 ': 'S', '83 ': 'S', '84 ': 'S', '85 ': 'N', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'I', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGTCCAAACAC-1_contig_2 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCTAAGCAGCTCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD6-6*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCTAAGCAGCTCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGANNNNAGCAGCTCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDLSSSFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXSSSFDYWGQGTLVTVSS | 1 | 296 | 301.0 | 309.0 | 310 | 352 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGCAGCTCG | SSS | AGCAGCTCG | SSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTAAGCAGCTCGTTTGACTAC | ARDLSSSFDY | TGTGCGAGAGATCTAAGCAGCTCGTTTGACTACTGG | 36.0 | CARDLSSSFDYW | 12.0 | 463.037 | 17.992 | 83.363 | 136S296M127S | 436S6N9M114S3N | 445S5N43M71S | 2.6670000000000002e-132 | 0.9606 | 4.375e-20 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 437.0 | 445.0 | 7.0 | 15.0 | 446 | 488 | 6 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 455.0 | 487.0 | 425.0 | 454.0 | TCTA | 4 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGTCCAAACAC-1_contig_1 | TGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCNNACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXTFGQGTKVEIK | 1 | 286 | null | null | 289 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTCGAACG | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGAACGTTC | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 66.059 | 96S286M172S1N | null | 384S4N34M136S | 1.2949999999999999e-127 | null | 7.016e-15 | 100.0 | null | 100.0 | 97 | 382 | 1 | 286 | null | null | null | null | 385 | 418 | 5 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGTCCTTTACA-1_contig_1 | GCAGAGCCTGCTGAATTCTGGCTGACCAGGGCAGTCACCAGAGCTCCAGACAATGTCTGTCTCCTTCCTCATCTTCCTGCCCGTGCTGGGCCTCCCATGGGGTGTCCTGTCACAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGCCGCAGAAGCGTACATTACTATGATAGTAGTGGTTATAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV6-1*01 | IGHD3-22*01 | IGHJ3*02 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGCCGCAGAAGCGTACATTACTATGATAGTAGTGGTTATAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGNNNNNNNNNNNNNNNATTACTATGATAGTAGTGGTTATNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGRRSVHYYDSSGYSAFDIWGQGTMVTVSS | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARXXXXXXYYDSSGYXAFDIWGQGTMVTVSS | 1 | 304 | 320.0 | 342.0 | 345 | 391 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAR | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAR | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCC | QVQLQQSGPGLVKPSQTLSLTCAIS | GGGGACAGTGTCTCTAGCAACAGTGCTGCT | GDSVSSNSAA | TGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGG | WNWIRQSPSRGLEWLGR | ACATACTACAGGTCCAAGTGGTATAAT | TYYRSKWYN | GATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGT | DYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCAAGAGGCCGCAGAAGCGTACATTACTATGATAGTAGTGGTTATAGTGCTTTTGATATC | ARGRRSVHYYDSSGYSAFDI | TGTGCAAGAGGCCGCAGAAGCGTACATTACTATGATAGTAGTGGTTATAGTGCTTTTGATATCTGG | 66.0 | CARGRRSVHYYDSSGYSAFDIW | 22.0 | 475.502 | 44.909 | 91.054 | 112S304M158S1N | 431S2N23M120S6N | 456S3N47M71S | 4.824e-136 | 7.785e-09 | 2.176e-22 | 100.0 | 100.0 | 100.0 | 113 | 416 | 1 | 304 | 432.0 | 454.0 | 3.0 | 25.0 | 457 | 503 | 4 | 50 | 113 | 187 | 188 | 217 | 218 | 268 | 269 | 295 | 296 | 409 | 470.0 | 502.0 | 410.0 | 469.0 | GCCGCAGAAGCGTAC | 15 | AG | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'I', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'D', '29 ': 'S', '30 ': 'V', '31 ': 'S', '34 ': 'S', '35 ': 'N', '36 ': 'S', '37 ': 'A', '38 ': 'A'}, 'fwh2': {'39 ': 'W', '40 ': 'N', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'S', '46 ': 'P', '47 ': 'S', '48 ': 'R', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'T', '57 ': 'Y', '58 ': 'Y', '59 ': 'R', '60 ': 'S', '62 ': 'K', '63 ': 'W', '64 ': 'Y', '65 ': 'N'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'V', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'I', '77 ': 'T', '78 ': 'I', '79 ': 'N', '80 ': 'P', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'Q', '91 ': 'L', '92 ': 'N', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'R', '110 ': 'S', '111 ': 'V', '111A': 'H', '111B': 'Y', '111C': 'Y', '112D': 'D', '112C': 'S', '112B': 'S', '112A': 'G', '112 ': 'Y', '113 ': 'S', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGTCCTTTACA-1_contig_2 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCGCTCACT | QQYDNLPLT | TGTCAACAGTATGATAATCTCCCGCTCACTTTC | 33.0 | CQQYDNLPLTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGTCGAGAACG-1_contig_2 | AGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACACTGATCGGGTGGTAGCTGCCCCACTAGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD2-15*01 | IGHJ5*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACACTGATCGGGTGGTAGCTGCCCCACTAGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACANNNNNNNGGTGGTAGCTGCNNNNNNNGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHTDRVVAAPLDPWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXXVVAAXXDPWGQGTLVTVSS | 1 | 298 | 306.0 | 317.0 | 325 | 364 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | GGTGGTAGCTGC | VVAA | GGTGGTAGCTGC | VVAA | GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DPWGQGTLVTVSS | GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DPWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACACTGATCGGGTGGTAGCTGCCCCACTAGACCCC | AHTDRVVAAPLDP | TGTGCACACACTGATCGGGTGGTAGCTGCCCCACTAGACCCCTGG | 45.0 | CAHTDRVVAAPLDPW | 15.0 | 466.153 | 23.76 | 77.595 | 77S298M137S3N | 382S13N12M118S6N | 401S11N40M71S | 2.8039999999999997e-133 | 0.01612 | 2.18e-18 | 100.0 | 100.0 | 100.0 | 78 | 375 | 1 | 298 | 383.0 | 394.0 | 14.0 | 25.0 | 402 | 441 | 12 | 51 | 78 | 152 | 153 | 182 | 183 | 233 | 234 | 254 | 255 | 368 | 408.0 | 440.0 | 369.0 | 407.0 | CTGATCG | 7 | CCCACTA | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'T', '108 ': 'D', '109 ': 'R', '110 ': 'V', '111 ': 'V', '112 ': 'A', '113 ': 'A', '114 ': 'P', '115 ': 'L', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGTCGAGAACG-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPGTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXTFGQGTKVEIK | 1 | 285 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTGGGACG | QQSYSTPGT | TGTCAACAGAGTTACAGTACCCCTGGGACGTTC | 33.0 | CQQSYSTPGTF | 11.0 | 445.898 | null | 69.904 | 89S285M173S2N | null | 375S2N36M136S | 3.763e-127 | null | 4.818e-16 | 100.0 | null | 100.0 | 90 | 374 | 1 | 285 | null | null | null | null | 376 | 411 | 3 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAACGGGTCGTCACGG-1_contig_1 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGATGTAGTAGTACCAGCTGCTATGAACTAATGCCAAAGGCCAAGGGGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD2-2*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGATGTAGTAGTACCAGCTGCTATGAACTAATGCCAAAGGCCAAGGGGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNTGTAGTAGTACCAGCTGCTATGNNNNNNNNNNNNNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREGCSSTSCYELMPKAKGDYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXCSSTSCYXXXXXXXXXYFDYWGQGTLVTVSS | 1 | 296 | 301.0 | 322.0 | 347 | 394 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TGTAGTAGTACCAGCTGCTATG | CSSTSCY | TGTAGTAGTACCAGCTGCTATG | CSSTSCY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGGGATGTAGTAGTACCAGCTGCTATGAACTAATGCCAAAGGCCAAGGGGGACTACTTTGACTAC | AREGCSSTSCYELMPKAKGDYFDY | TGTGCGAGAGAGGGATGTAGTAGTACCAGCTGCTATGAACTAATGCCAAAGGCCAAGGGGGACTACTTTGACTACTGG | 78.0 | CAREGCSSTSCYELMPKAKGDYFDYW | 26.0 | 463.037 | 42.986 | 92.976 | 124S296M169S | 424S7N22M143S2N | 470S48M71S | 2.802e-132 | 3.03e-08 | 5.891e-23 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 425.0 | 446.0 | 8.0 | 29.0 | 471 | 518 | 1 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 485.0 | 517.0 | 413.0 | 484.0 | GGGA | 4 | AACTAATGCCAAAGGCCAAGGGGG | 24.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'C', '110 ': 'S', '111 ': 'S', '111A': 'T', '111B': 'S', '111C': 'C', '111D': 'Y', '111E': 'E', '112F': 'L', '112E': 'M', '112D': 'P', '112C': 'K', '112B': 'A', '112A': 'K', '112 ': 'G', '113 ': 'D', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAACGGGTCGTCACGG-1_contig_2 | GGAGTCAGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCGTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ4*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCGTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCNTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYRFGGGTKVEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYXFGGGTKVEIK | 1 | 283 | null | null | 285 | 316 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSY | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSY | null | null | null | null | TTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | FGGGTKVEIK | TTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | FGGGTKVEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGCTTAATAGTTACCGT | QQLNSYR | TGTCAACAGCTTAATAGTTACCGTTTC | 27.0 | CQQLNSYRF | 9.0 | 442.782 | null | 62.213 | 92S283M169S4N | null | 376S6N32M136S | 3.244e-126 | null | 9.899e-14 | 100.0 | null | 100.0 | 93 | 375 | 1 | 283 | null | null | null | null | 377 | 408 | 7 | 38 | 93 | 170 | 171 | 188 | 189 | 239 | 240 | 248 | 249 | 356 | 378.0 | 407.0 | 357.0 | 377.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '115 ': 'S', '116 ': 'Y', '117 ': 'R'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGAGAAGGTTT-1_contig_2 | CTTATCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATGTGGAGCTAGTTGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD1-26*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATGTGGAGCTAGTTGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATNNGGAGCTANNNNNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDVELVGYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXELXXYGMDVWGQGTTVTVSS | 1 | 297 | 300.0 | 306.0 | 313 | 360 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GGAGCTA | EL | GGAGCTA | EL | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATGTGGAGCTAGTTGGGTACGGTATGGACGTC | AKDVELVGYGMDV | TGTGCAAAAGATGTGGAGCTAGTTGGGTACGGTATGGACGTCTGG | 45.0 | CAKDVELVGYGMDVW | 15.0 | 464.595 | 14.146 | 92.976 | 148S297M135S1N | 447S9N7M126S4N | 460S14N48M72S | 9.362999999999999e-133 | 14.34 | 5.799e-23 | 100.0 | 100.0 | 100.0 | 149 | 445 | 1 | 297 | 448.0 | 454.0 | 10.0 | 16.0 | 461 | 508 | 15 | 62 | 149 | 223 | 224 | 247 | 248 | 298 | 299 | 322 | 323 | 436 | 476.0 | 508.0 | 437.0 | 475.0 | GT | 2 | GTTGGG | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'V', '109 ': 'E', '110 ': 'L', '111 ': 'V', '112 ': 'G', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGAGAAGGTTT-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPITFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPITFGQGTRLEIK | 1 | 284 | null | null | 285 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACTGGCCGATCACC | QQRSNWPIT | TGTCAGCAGCGTAGCAACTGGCCGATCACCTTC | 33.0 | CQQRSNWPITF | 11.0 | 444.34 | null | 73.749 | 107S284M174S3N | null | 391S38M136S | 1.147e-126 | null | 3.465e-17 | 100.0 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 392 | 429 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGAGACACTAA-1_contig_1 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGCGGTGAGCGGATATTGTAGTGGTGGTAGCTGCTACCACGCCATAAAGGAAGCGGGGGGCCTGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD2-15*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGCGGTGAGCGGATATTGTAGTGGTGGTAGCTGCTACCACGCCATAAAGGAAGCGGGGGGCCTGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNGGATATTGTAGTGGTGGTAGCTGCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAVSGYCSGGSCYHAIKEAGGLYYFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXGYCSGGSCYXXXXXXXXXXYFDYWGQGTLVTVSS | 1 | 295 | 304.0 | 330.0 | 359 | 406 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | GGATATTGTAGTGGTGGTAGCTGCTAC | GYCSGGSCY | GGATATTGTAGTGGTGGTAGCTGCTAC | GYCSGGSCY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCGGTGAGCGGATATTGTAGTGGTGGTAGCTGCTACCACGCCATAAAGGAAGCGGGGGGCCTGTACTACTTTGACTAC | ARAVSGYCSGGSCYHAIKEAGGLYYFDY | TGTGCGAGAGCGGTGAGCGGATATTGTAGTGGTGGTAGCTGCTACCACGCCATAAAGGAAGCGGGGGGCCTGTACTACTTTGACTACTGG | 90.0 | CARAVSGYCSGGSCYHAIKEAGGLYYFDYW | 30.0 | 461.479 | 52.6 | 92.976 | 121S295M182S1N | 424S1N27M147S3N | 479S48M71S | 8.384000000000001e-132 | 3.928e-11 | 5.983e-23 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 425.0 | 451.0 | 2.0 | 28.0 | 480 | 527 | 1 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 494.0 | 526.0 | 410.0 | 493.0 | CGGTGAGC | 8 | CACGCCATAAAGGAAGCGGGGGGCCTGT | 28.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'V', '109 ': 'S', '110 ': 'G', '111 ': 'Y', '111A': 'C', '111B': 'S', '111C': 'G', '111D': 'G', '111E': 'S', '111F': 'C', '111G': 'Y', '112H': 'H', '112G': 'A', '112F': 'I', '112E': 'K', '112D': 'E', '112C': 'A', '112B': 'G', '112A': 'G', '112 ': 'L', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGAGACACTAA-1_contig_2 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGACCGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ3*02 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGACCGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGANNGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLTVFGGGTKLTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLXVFGGGTKLTVL | 1 | 292 | null | null | 295 | 328 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGA | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGA | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | null | null | null | null | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCCTATGACAGCAGCCTGACCGTG | QSYDSSLTV | TGCCAGTCCTATGACAGCAGCCTGACCGTGTTC | 33.0 | CQSYDSSLTVF | 11.0 | 456.805 | null | 66.059 | 108S292M247S7N | null | 402S4N34M211S | 2.3249999999999998e-130 | null | 8.218e-15 | 100.0 | null | 100.0 | 109 | 400 | 1 | 292 | null | null | null | null | 403 | 436 | 5 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 406.0 | 435.0 | 379.0 | 405.0 | CC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'L', '116 ': 'T', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGAGACTGGGT-1_contig_1 | CCACATCCCTCCTCAGAAGCCCCCAGAGCACAACTCCTTACCATGGACTGGACCTGGAGGATCCTCTTTTTGGTGGCAGCAGCCACAGGTGCCCACTCCCAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGATGAGGGCGGCTACGGCGCCCTTTTCTGGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-3*01 | IGHD6-25*01 | IGHJ6*02 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGATGAGGGCGGCTACGGCGCCCTTTTCTGGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGANNNNNGCGGCTACNNNNNNNNNNNNNNNTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDEGGYGALFWYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARXXXGYXXXXXYYGMDVWGQGTTVTVSS | 1 | 296 | 302.0 | 309.0 | 325 | 375 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | GCGGCTAC | GY | GCGGCTAC | GY | TACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | TACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGG | MHWVRQAPGQRLEWMGW | ATCAACGCTGGCAATGGTAACACA | INAGNGNT | AAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGT | KYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATGAGGGCGGCTACGGCGCCCTTTTCTGGTACTACGGTATGGACGTC | ARDEGGYGALFWYYGMDV | TGTGCGAGAGATGAGGGCGGCTACGGCGCCCTTTTCTGGTACTACGGTATGGACGTCTGG | 60.0 | CARDEGGYGALFWYYGMDVW | 20.0 | 463.037 | 16.069 | 98.744 | 99S296M151S | 400S10N8M138S | 423S11N51M72S | 2.602e-132 | 3.556 | 1.001e-24 | 100.0 | 100.0 | 100.0 | 100 | 395 | 1 | 296 | 401.0 | 408.0 | 11.0 | 18.0 | 424 | 474 | 12 | 62 | 100 | 174 | 175 | 198 | 199 | 249 | 250 | 273 | 274 | 387 | 442.0 | 474.0 | 388.0 | 441.0 | TGAGG | 5 | GGCGCCCTTTTCTGG | 15.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'A', '59 ': 'G', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'K', '67 ': 'Y', '68 ': 'S', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'A', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'E', '109 ': 'G', '110 ': 'G', '111 ': 'Y', '111A': 'G', '111B': 'A', '112C': 'L', '112B': 'F', '112A': 'W', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGAGACTGGGT-1_contig_2 | AGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ3*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCNNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPLFTFGPGTKVDIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPXFTFGPGTKVDIK | 1 | 287 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGCGTAGCAACTGGCCTCCCCTATTCACT | QQRSNWPPLFT | TGTCAGCAGCGTAGCAACTGGCCTCCCCTATTCACTTTC | 39.0 | CQQRSNWPPLFTF | 13.0 | 449.014 | null | 73.749 | 104S287M177S | null | 394S38M136S | 4.515e-128 | null | 3.483e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 395 | 432 | 1 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | CCT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'P', '115 ': 'L', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGAGCCCGAAA-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACCTCGATAGTAGTGGTTATTATAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACCTCGATAGTAGTGGTTATTATAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNGATAGTAGTGGTTATTANNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDLDSSGYYSDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXDSSGYXXDYWGQGTLVTVSS | 1 | 296 | 301.0 | 317.0 | 322 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GATAGTAGTGGTTATTA | DSSGY | GATAGTAGTGGTTATTA | DSSGY | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGACCTCGATAGTAGTGGTTATTATAGCGACTAC | ARDLDSSGYYSDY | TGTGCGAGGGACCTCGATAGTAGTGGTTATTATAGCGACTACTGG | 45.0 | CARDLDSSGYYSDYW | 15.0 | 459.921 | 33.373 | 77.595 | 136S296M136S | 436S10N17M115S4N | 457S8N40M71S | 2.352e-131 | 2.287e-05 | 2.423e-18 | 99.662 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 437.0 | 453.0 | 11.0 | 27.0 | 458 | 497 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | CCTC | 4 | TAGC | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'D', '110 ': 'S', '111 ': 'S', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'S', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGAGCCCGAAA-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTCGAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTCGAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTNNNNNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTRGVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTXXVFGGGTKLTVL | 1 | 282 | null | null | 288 | 322 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTCGAGGGGTA | QAWDSSTRGV | TGTCAGGCGTGGGACAGCAGCACTCGAGGGGTATTC | 36.0 | CQAWDSSTRGVF | 12.0 | 441.224 | null | 67.981 | 94S282M251S3N | null | 381S3N35M211S | 1.1029999999999999e-125 | null | 2.099e-15 | 100.0 | null | 100.0 | 95 | 376 | 1 | 282 | null | null | null | null | 382 | 416 | 4 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 386.0 | 415.0 | 356.0 | 385.0 | CGAGG | 5 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'R', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGAGTGACATA-1_contig_1 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGACGTGGTGGATCGGGGTTGGAGGTAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGACGTGGTGGATCGGGGTTGGAGGTAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNTGGTTCGGGGNNNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGRGGSGLEVDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXGSGXXXDYWGQGTLVTVSS | 1 | 295 | 303.0 | 312.0 | 322 | 361 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TGGATCGGGG | GSG | TGGTTCGGGG | GSG | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGACGTGGTGGATCGGGGTTGGAGGTAGACTAC | ARGRGGSGLEVDY | TGTGCGAGAGGACGTGGTGGATCGGGGTTGGAGGTAGACTACTGG | 45.0 | CARGRGGSGLEVDYW | 15.0 | 461.479 | 14.146 | 77.595 | 124S295M137S1N | 426S9N10M120S12N | 445S8N40M71S | 7.810000000000001e-132 | 13.73 | 2.371e-18 | 100.0 | 90.0 | 100.0 | 125 | 419 | 1 | 295 | 427.0 | 436.0 | 10.0 | 19.0 | 446 | 485 | 9 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 452.0 | 484.0 | 413.0 | 451.0 | GACGTGG | 7 | TTGGAGGTA | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'G', '110 ': 'G', '111 ': 'S', '112 ': 'G', '113 ': 'L', '114 ': 'E', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGAGTGACATA-1_contig_2 | TGGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCGGATCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCGGATCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNNNTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTRITFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXXTFGPGTKVDIK | 1 | 283 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCGGATCACT | QQSYSTRIT | TGTCAACAGAGTTACAGTACCCGGATCACTTTC | 33.0 | CQQSYSTRITF | 11.0 | 442.782 | null | 69.904 | 98S283M175S4N | null | 384S2N36M136S | 3.3199999999999997e-126 | null | 4.899e-16 | 100.0 | null | 100.0 | 99 | 381 | 1 | 283 | null | null | null | null | 385 | 420 | 3 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | GGA | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'R', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGCACCATCCT-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAGGTTATAGCAGCCGCGACCCTTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD6-13*01 | IGHJ2*01 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAGGTTATAGCAGCCGCGACCCTTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGANNNNNTATAGCAGCNNNNNNNNNNNACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARQVIAAATLDWYFDLWGRGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXIAAXXXXWYFDLWGRGTLVTVSS | 1 | 297 | 303.0 | 311.0 | 323 | 373 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TATAGCAGC | IAA | TATAGCAGC | IAA | ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAGACAGGTTATAGCAGCCGCGACCCTTGACTGGTACTTCGATCTC | ARQVIAAATLDWYFDL | TGTGCGAGACAGGTTATAGCAGCCGCGACCCTTGACTGGTACTTCGATCTCTGG | 54.0 | CARQVIAAATLDWYFDLW | 18.0 | 464.595 | 17.992 | 98.744 | 92S297M147S2N | 394S3N9M133S9N | 414S2N51M71S | 8.665e-133 | 0.9204 | 9.819e-25 | 100.0 | 100.0 | 100.0 | 93 | 389 | 1 | 297 | 395.0 | 403.0 | 4.0 | 12.0 | 415 | 465 | 3 | 53 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 432.0 | 464.0 | 384.0 | 431.0 | CAGGT | 5 | CGCGACCCTTG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'Q', '108 ': 'V', '109 ': 'I', '110 ': 'A', '111 ': 'A', '111A': 'A', '112B': 'T', '112A': 'L', '112 ': 'D', '113 ': 'W', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGCACCATCCT-1_contig_2 | TGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTKLEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACCCCGTACACT | MQALQTPYT | TGCATGCAAGCTCTACAAACCCCGTACACTTTT | 33.0 | CMQALQTPYTF | 11.0 | 464.595 | null | 73.749 | 95S299M174S3N | null | 394S1N38M136S | 9.210999999999999e-133 | null | 3.483e-17 | 99.666 | null | 100.0 | 96 | 394 | 1 | 299 | null | null | null | null | 395 | 432 | 2 | 39 | 96 | 173 | 174 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGCAGATTGCT-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAAGCTATTACTATGATAGTAGTGCCCCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD3-22*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAAGCTATTACTATGATAGTAGTGCCCCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNTATTACTATGATAGTAGTGNNNNCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGSYYYDSSAPYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXYYYDSSXXYGMDVWGQGTTVTVSS | 1 | 295 | 301.0 | 319.0 | 324 | 372 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | TATTACTATGATAGTAGTG | YYYDSS | TATTACTATGATAGTAGTG | YYYDSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGAAGCTATTACTATGATAGTAGTGCCCCCTACGGTATGGACGTC | ARGSYYYDSSAPYGMDV | TGTGCGAGAGGAAGCTATTACTATGATAGTAGTGCCCCCTACGGTATGGACGTCTGG | 57.0 | CARGSYYYDSSAPYGMDVW | 19.0 | 461.479 | 37.218 | 94.899 | 115S295M149S1N | 415S1N19M125S11N | 438S13N49M72S | 7.854e-132 | 1.566e-06 | 1.4729999999999998e-23 | 100.0 | 100.0 | 100.0 | 116 | 410 | 1 | 295 | 416.0 | 434.0 | 2.0 | 20.0 | 439 | 487 | 14 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 455.0 | 487.0 | 404.0 | 454.0 | GAAGC | 5 | CCCC | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'Y', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '112B': 'S', '112A': 'A', '112 ': 'P', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGCAGATTGCT-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCTCTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCTCTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCNNTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTALFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAXFGGGTKLTVL | 1 | 284 | null | null | 287 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | null | null | null | null | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGCTCTA | QAWDSSTAL | TGTCAGGCGTGGGACAGCAGCACTGCTCTATTC | 33.0 | CQAWDSSTALF | 11.0 | 444.34 | null | 64.136 | 94S284M246S1N | null | 380S5N33M211S | 1.266e-126 | null | 3.003e-14 | 100.0 | null | 100.0 | 95 | 378 | 1 | 284 | null | null | null | null | 381 | 413 | 6 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | TC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'A', '117 ': 'L'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGCATGTAGTC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGCCTAAGAGCCCCACCCAGCAGCTGGCACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGCCTAAGAGCCCCACCCAGCAGCTGGCACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGNNNNNNNNNNNNNNNCAGCAGCTGGNNNNNNCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAPKSPTQQLAPTWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXQQLXXXWGQGTLVTVSS | 1 | 291 | 307.0 | 316.0 | 323 | 358 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGCAGCTGG | QQL | CAGCAGCTGG | QQL | CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGCCTAAGAGCCCCACCCAGCAGCTGGCACCTACC | APKSPTQQLAPT | TGTGCGCCTAAGAGCCCCACCCAGCAGCTGGCACCTACCTGG | 42.0 | CAPKSPTQQLAPTW | 14.0 | 455.247 | 19.914 | 69.904 | 136S291M138S5N | 442S8N10M113S3N | 458S15N36M71S | 5.972e-130 | 0.2561 | 4.98e-16 | 100.0 | 100.0 | 100.0 | 137 | 427 | 1 | 291 | 443.0 | 452.0 | 9.0 | 18.0 | 459 | 494 | 16 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 461.0 | 493.0 | 425.0 | 460.0 | CCTAAGAGCCCCACC | 15 | CACCTA | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'P', '107 ': 'K', '108 ': 'S', '109 ': 'P', '110 ': 'T', '112 ': 'Q', '113 ': 'Q', '114 ': 'L', '115 ': 'A', '116 ': 'P', '117 ': 'T'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGCATGTAGTC-1_contig_1 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCTCCGTGGACG | QQYNNWPPWT | TGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTC | 36.0 | CQQYNNWPPWTF | 12.0 | 449.014 | null | 73.749 | 104S287M174S | null | 391S38M136S | 4.49e-128 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTAAGCACG-1_contig_2 | TTATCTGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAGGAAACTACGTATTACGATTTTTGGAGTGGTTATTATGACCGGGGGCCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-3*01 | IGHJ4*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAGGAAACTACGTATTACGATTTTTGGAGTGGTTATTATGACCGGGGGCCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACANNNNNNNNNGTATTACGATTTTTGGAGTGGTTATTATNNNNNNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARQETTYYDFWSGYYDRGPLDYWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXYYDFWSGYYXXXXXDYWGQGTLVTVSS | 1 | 299 | 309.0 | 336.0 | 350 | 391 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATTACGATTTTTGGAGTGGTTATTAT | YYDFWSGYY | GTATTACGATTTTTGGAGTGGTTATTAT | YYDFWSGYY | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACAGGAAACTACGTATTACGATTTTTGGAGTGGTTATTATGACCGGGGGCCCCTTGACTAC | ARQETTYYDFWSGYYDRGPLDY | TGTGCGAGACAGGAAACTACGTATTACGATTTTTGGAGTGGTTATTATGACCGGGGGCCCCTTGACTACTGG | 72.0 | CARQETTYYDFWSGYYDRGPLDYW | 24.0 | 467.712 | 54.523 | 81.44 | 102S299M163S | 410S28M126S3N | 451S6N42M71S | 1.0539999999999999e-133 | 9.762e-12 | 1.674e-19 | 100.0 | 100.0 | 100.0 | 103 | 401 | 1 | 299 | 411.0 | 438.0 | 1.0 | 28.0 | 452 | 493 | 7 | 48 | 103 | 177 | 178 | 207 | 208 | 258 | 259 | 279 | 280 | 393 | 460.0 | 492.0 | 394.0 | 459.0 | GGAAACTAC | 9 | GACCGGGGGCCCC | 13.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'Q', '108 ': 'E', '109 ': 'T', '110 ': 'T', '111 ': 'Y', '111A': 'Y', '111B': 'D', '111C': 'F', '111D': 'W', '112E': 'S', '112D': 'G', '112C': 'Y', '112B': 'Y', '112A': 'D', '112 ': 'R', '113 ': 'G', '114 ': 'P', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTAAGCACG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-12*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | 1 | 284 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGGCTAACAGTTTCCCCCTCACT | QQANSFPLT | TGTCAACAGGCTAACAGTTTCCCCCTCACTTTC | 33.0 | CQQANSFPLTF | 11.0 | 444.34 | null | 71.827 | 93S284M174S3N | null | 378S1N37M136S | 1.117e-126 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTATGGTTC-1_contig_1 | AGCATCATCCAGAAACCACATCCCTCCGCTAGAGAAGCCCCTGACGGCACAGTTCCTCACTATGGACTGGATTTGGAGGATCCTCTTCTTGGTGGGAGCAGCGACAGGTGCCCACTCCCAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATTCACCTTTACTAGCTCTGCTATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGTGCGGCAGACTCCTTCCAACTGGGGTCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-58*02 | IGHD7-27*01 | IGHJ6*02 | CAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATTCACCTTTACTAGCTCTGCTATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGTGCGGCAGACTCCTTCCAACTGGGGTCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATTCACCTTTACTAGCTCTGCTATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGTGCGGCAGANNNNNNNNAACTGGGGNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAMQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAADSFQLGSYYYGMDVWGQGTTVTVSS | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAMQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAXXXXLGXYYYGMDVWGQGTTVTVSS | 1 | 296 | 305.0 | 312.0 | 315 | 369 | CAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATTCACCTTTACTAGCTCTGCTATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGTGCGGCAGA | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAMQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAA | CAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATTCACCTTTACTAGCTCTGCTATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGTGCGGCAGA | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAMQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAA | AACTGGGG | LG | AACTGGGG | LG | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAAATGCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QMQLVQSGPEVKKPGTSVKVSCKAS | GGATTCACCTTTACTAGCTCTGCT | GFTFTSSA | ATGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGG | MQWVRQARGQRLEWIGW | ATCGTCGTTGGCAGTGGTAACACA | IVVGSGNT | AACTACGCACAGAAGTTCCAGGAAAGAGTCACCATTACCAGGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGCCGTGTATTACTGT | NYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGGCAGACTCCTTCCAACTGGGGTCCTACTACTACGGTATGGACGTC | AADSFQLGSYYYGMDV | TGTGCGGCAGACTCCTTCCAACTGGGGTCCTACTACTACGGTATGGACGTCTGG | 54.0 | CAADSFQLGSYYYGMDVW | 18.0 | 463.037 | 16.069 | 106.435 | 118S296M145S | 422S2N8M129S1N | 432S7N55M72S | 2.6670000000000002e-132 | 3.642 | 4.961e-27 | 100.0 | 100.0 | 100.0 | 119 | 414 | 1 | 296 | 423.0 | 430.0 | 3.0 | 10.0 | 433 | 487 | 8 | 62 | 119 | 193 | 194 | 217 | 218 | 268 | 269 | 292 | 293 | 406 | 455.0 | 487.0 | 407.0 | 454.0 | CTCCTTCC | 8 | TC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'M', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'T', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'S', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'Q', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'R', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'V', '58 ': 'V', '59 ': 'G', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'E', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'M', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'A', '107 ': 'D', '108 ': 'S', '109 ': 'F', '110 ': 'Q', '111 ': 'L', '111A': 'G', '112B': 'S', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTATGGTTC-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTNTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLWVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLWVFGGGTKLTVL | 1 | 296 | null | null | 298 | 334 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCTGTGGGTG | SSYTSSSTLWV | TGCAGCTCATATACAAGCAGCAGCACTCTGTGGGTGTTC | 39.0 | CSSYTSSSTLWVF | 13.0 | 463.037 | null | 71.827 | 98S296M249S1N | null | 395S1N37M211S | 3.072e-132 | null | 1.498e-16 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 396 | 432 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | G | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTCGCGTGT-1_contig_2 | TGGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGTATAGCAGTGGCTAGTAAGTGGGTTAGCGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD6-19*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGTATAGCAGTGGCTAGTAAGTGGGTTAGCGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGTATAGCAGTGGCTGGTANNNNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHSIAVASKWVSVFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHSIAVAGXXXXXFDYWGQGTLVTVSS | 1 | 299 | 300.0 | 316.0 | 330 | 373 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | TATAGCAGTGGCTAGTA | IAVAS | TATAGCAGTGGCTGGTA | IAVAG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAGTATAGCAGTGGCTAGTAAGTGGGTTAGCGTCTTTGACTAC | AHSIAVASKWVSVFDY | TGTGCACACAGTATAGCAGTGGCTAGTAAGTGGGTTAGCGTCTTTGACTACTGG | 54.0 | CAHSIAVASKWVSVFDYW | 18.0 | 467.712 | 27.605 | 85.286 | 82S299M145S2N | 381S3N17M128S1N | 411S4N44M71S | 9.797e-134 | 0.001153 | 1.0840000000000001e-20 | 100.0 | 94.118 | 100.0 | 83 | 381 | 1 | 299 | 382.0 | 398.0 | 4.0 | 20.0 | 412 | 455 | 5 | 48 | 83 | 157 | 158 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 422.0 | 454.0 | 374.0 | 421.0 | null | 0 | AGTGGGTTAGCGT | 13.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'S', '108 ': 'I', '109 ': 'A', '110 ': 'V', '111 ': 'A', '111A': 'S', '112B': 'K', '112A': 'W', '112 ': 'V', '113 ': 'S', '114 ': 'V', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTCGCGTGT-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTCTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ3*02 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTCTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCNNTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDLWVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXWVFGGGTKLTVL | 1 | 286 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCTCTGGGTG | QVWDSSSDLWV | TGTCAGGTGTGGGATAGTAGTAGTGATCTCTGGGTGTTC | 39.0 | CQVWDSSSDLWVF | 13.0 | 447.456 | null | 71.827 | 97S286M250S4N | null | 385S1N37M211S | 1.4819999999999999e-127 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | TC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'L', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTCGGCATC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGTGGGGCGGGTAAGCAGTGGCTGGTACGGGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGTGGGGCGGGTAAGCAGTGGCTGGTACGGGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNNNNNAGCAGTGGCTGGTACNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGRVSSGWYGGFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXSSGWYXXFDYWGQGTLVTVSS | 1 | 295 | 307.0 | 321.0 | 327 | 370 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGCAGTGGCTGGTAC | SSGWY | AGCAGTGGCTGGTAC | SSGWY | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTGGGGCGGGTAAGCAGTGGCTGGTACGGGGGCTTTGACTAC | ARVGRVSSGWYGGFDY | TGTGCGAGAGTGGGGCGGGTAAGCAGTGGCTGGTACGGGGGCTTTGACTACTGG | 54.0 | CARVGRVSSGWYGGFDYW | 18.0 | 461.479 | 29.528 | 85.286 | 124S295M146S1N | 430S6N15M120S | 450S4N44M71S | 7.943e-132 | 0.000327 | 1.1670000000000001e-20 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 431.0 | 445.0 | 7.0 | 21.0 | 451 | 494 | 5 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 461.0 | 493.0 | 413.0 | 460.0 | TGGGGCGGGTA | 11 | GGGGG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'G', '109 ': 'R', '110 ': 'V', '111 ': 'S', '111A': 'S', '112B': 'G', '112A': 'W', '112 ': 'Y', '113 ': 'G', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTCGGCATC-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | 1 | 304 | null | null | 305 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCTCTCACT | QQYYSTPLT | TGTCAGCAATATTATAGTACTCCTCTCACTTTC | 33.0 | CQQYYSTPLTF | 11.0 | 475.502 | null | 69.904 | 90S304M172S1N | null | 394S2N36M136S | 4.78e-136 | null | 4.989e-16 | 100.0 | null | 100.0 | 91 | 394 | 1 | 304 | null | null | null | null | 395 | 430 | 3 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTCTGCCAG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAATTCGATTACGATTTTTGGAGTGGCCCTTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-3*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAATTCGATTACGATTTTTGGAGTGGCCCTTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNATTACGATTTTTGGAGTGGNNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANSITIFGVALYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXITIFGVXXYWGQGTLVTVSS | 1 | 293 | 298.0 | 316.0 | 322 | 358 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | ATTACGATTTTTGGAGTGG | ITIFGV | ATTACGATTTTTGGAGTGG | ITIFGV | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAATTCGATTACGATTTTTGGAGTGGCCCTTTAC | ANSITIFGVALY | TGTGCGAATTCGATTACGATTTTTGGAGTGGCCCTTTACTGG | 42.0 | CANSITIFGVALYW | 14.0 | 458.363 | 37.218 | 71.827 | 136S293M136S3N | 433S2N19M113S10N | 457S11N37M71S | 6.887000000000005e-131 | 1.583e-06 | 1.314e-16 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 434.0 | 452.0 | 3.0 | 21.0 | 458 | 494 | 12 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 461.0 | 493.0 | 425.0 | 460.0 | TTCG | 4 | CCCTT | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'S', '108 ': 'I', '109 ': 'T', '110 ': 'I', '112 ': 'F', '113 ': 'G', '114 ': 'V', '115 ': 'A', '116 ': 'L', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTCTGCCAG-1_contig_1 | ATGAGCAAAACTGACAAGTCAAGGCAGGAAGATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTTCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV6-21*01 | null | IGKJ4*01 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTTCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSFPLTFGGGTKVEIK | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLPLTFGGGTKVEIK | 1 | 284 | null | null | 286 | 322 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTTCC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSFP | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGT | EIVLTQSPDFQSVTPKEKVTITCRAS | CAGAGCATTGGTAGTAGC | QSIGSS | TTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAG | LHWYQQKPDQSPKLLIK | TATGCTTCC | YAS | CAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGT | QSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CATCAGAGTAGTAGTTTTCCCCTCACT | HQSSSFPLT | TGTCATCAGAGTAGTAGTTTTCCCCTCACTTTC | 33.0 | CHQSSSFPLTF | 11.0 | 441.224 | null | 71.827 | 88S284M174S3N | null | 373S1N37M136S | 9.59e-126 | null | 1.268e-16 | 99.648 | null | 100.0 | 89 | 372 | 1 | 284 | null | null | null | null | 374 | 410 | 2 | 38 | 89 | 166 | 167 | 184 | 185 | 235 | 236 | 244 | 245 | 352 | 380.0 | 409.0 | 353.0 | 379.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'F', '11 ': 'Q', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'K', '17 ': 'E', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'G', '37 ': 'S', '38 ': 'S'}, 'fwk2': {'39 ': 'L', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'D', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'K'}, 'cdrk2': {'56 ': 'Y', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'Q', '67 ': 'S', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'A', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'H', '106 ': 'Q', '107 ': 'S', '108 ': 'S', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTGCAACTT-1_contig_2 | TGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGAGGATACGGGGAGTGGGAGCAAACCAGGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD1-26*01 | IGHJ3*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGAGGATACGGGGAGTGGGAGCAAACCAGGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGNNNNNNNNNNNNAGTGGGAGCNNNNNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGGYGEWEQTRGAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKXXXXXWEXXXXAFDIWGQGTMVTVSS | 1 | 295 | 308.0 | 316.0 | 327 | 373 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | AGTGGGAGC | WE | AGTGGGAGC | WE | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCAAAAGGAGGATACGGGGAGTGGGAGCAAACCAGGGGTGCTTTTGATATC | AKGGYGEWEQTRGAFDI | TGTGCAAAAGGAGGATACGGGGAGTGGGAGCAAACCAGGGGTGCTTTTGATATCTGG | 57.0 | CAKGGYGEWEQTRGAFDIW | 19.0 | 461.479 | 17.992 | 91.054 | 142S295M149S3N | 449S5N9M128S6N | 468S3N47M71S | 8.207e-132 | 1.008 | 2.2219999999999996e-22 | 100.0 | 100.0 | 100.0 | 143 | 437 | 1 | 295 | 450.0 | 458.0 | 6.0 | 14.0 | 469 | 515 | 4 | 50 | 143 | 217 | 218 | 241 | 242 | 292 | 293 | 316 | 317 | 430 | 482.0 | 514.0 | 431.0 | 481.0 | GAGGATACGGGG | 12 | AAACCAGGGG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'G', '109 ': 'Y', '110 ': 'G', '111 ': 'E', '111A': 'W', '111B': 'E', '112B': 'Q', '112A': 'T', '112 ': 'R', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTGCAACTT-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ1*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSFYVFGTGTKVTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSXYVFGTGTKVTVL | 1 | 282 | null | null | 285 | 322 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSS | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSS | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGTGTGGGATAGTAGTAGTTTTTATGTC | QVWDSSSFYV | TGTCAGGTGTGGGATAGTAGTAGTTTTTATGTCTTC | 36.0 | CQVWDSSSFYVF | 12.0 | 441.224 | null | 73.749 | 97S282M251S8N | null | 381S38M211S | 1.108e-125 | null | 3.871e-17 | 100.0 | null | 100.0 | 98 | 379 | 1 | 282 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 389.0 | 418.0 | 359.0 | 388.0 | TT | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'F', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTGGTCCGT-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGTCTGAGGTGGGAGCTACAATCCGATCTCCAGGGATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGTCTGAGGTGGGAGCTACAATCCGATCTCCAGGGATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGNNNNNNNGTGGGAGCTACNNNNNNNNNNNNNNNNNTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGLRWELQSDLQGWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXWELXXXXXXWGQGTLVTVSS | 1 | 295 | 303.0 | 313.0 | 331 | 364 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTGGGAGCTAC | WEL | GTGGGAGCTAC | WEL | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGTCTGAGGTGGGAGCTACAATCCGATCTCCAGGGA | AKGLRWELQSDLQG | TGTGCGAAAGGTCTGAGGTGGGAGCTACAATCCGATCTCCAGGGATGG | 48.0 | CAKGLRWELQSDLQGW | 16.0 | 461.479 | 21.837 | 66.059 | 137S295M140S1N | 439S6N11M122S3N | 467S14N34M71S | 8.046e-132 | 0.06841 | 7.248e-15 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 440.0 | 450.0 | 7.0 | 17.0 | 468 | 501 | 15 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 468.0 | 500.0 | 426.0 | 467.0 | GTCTGAG | 7 | AATCCGATCTCCAGGGA | 17.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'L', '109 ': 'R', '110 ': 'W', '111 ': 'E', '112A': 'L', '112 ': 'Q', '113 ': 'S', '114 ': 'D', '115 ': 'L', '116 ': 'Q', '117 ': 'G'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTGGTCCGT-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCAGGGGGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ2*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCAGGGGGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGNNNNNNNGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGQGVVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGXXVVFGGGTKLTVL | 1 | 296 | null | null | 304 | 340 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGGCCAGGGGGTGGTA | GTWDSSLSAGQGVV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCAGGGGGTGGTATTC | 48.0 | CGTWDSSLSAGQGVVF | 16.0 | 463.037 | null | 71.827 | 93S296M255S | null | 396S1N37M211S | 3.077e-132 | null | 1.501e-16 | 100.0 | null | 100.0 | 94 | 389 | 1 | 296 | null | null | null | null | 397 | 433 | 2 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 403.0 | 432.0 | 361.0 | 402.0 | CCAGGGG | 7 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'L', '112A': 'S', '112 ': 'A', '113 ': 'G', '114 ': 'Q', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGGTGTGTGCC-1_contig_2 | GTATATGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCCACGGGCTATGGTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCCACGGGCTATGGTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCNNNNNGCTATGGTTNNNCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAHGLWLGYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXLWXXYWGQGTLVTVSS | 1 | 294 | 300.0 | 308.0 | 312 | 349 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCC | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCC | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GCTATGGTT | LW | GCTATGGTT | LW | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCCCACGGGCTATGGTTGGGCTAC | AHGLWLGY | TGTGCCCACGGGCTATGGTTGGGCTACTGG | 30.0 | CAHGLWLGYW | 10.0 | 459.921 | 17.992 | 73.749 | 125S294M126S5N | 424S9N9M112S2N | 436S10N38M71S | 2.252e-131 | 0.9361 | 3.339e-17 | 100.0 | 100.0 | 100.0 | 126 | 419 | 1 | 294 | 425.0 | 433.0 | 10.0 | 18.0 | 437 | 474 | 11 | 48 | 126 | 200 | 201 | 230 | 231 | 281 | 282 | 302 | 303 | 416 | 441.0 | 473.0 | 417.0 | 440.0 | CACGG | 5 | GGG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'G', '108 ': 'L', '114 ': 'W', '115 ': 'L', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGGTGTGTGCC-1_contig_1 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ3*02 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHLVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHLVFGGGTKLTVL | 1 | 290 | null | null | 291 | 325 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHL | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATCTGGTG | NSRDSSGNHLV | TGTAACTCCCGGGACAGCAGTGGTAACCATCTGGTGTTC | 39.0 | CNSRDSSGNHLVF | 13.0 | 453.689 | null | 67.981 | 97S290M246S | null | 387S3N35M211S | 1.971e-129 | null | 2.12e-15 | 100.0 | null | 100.0 | 98 | 387 | 1 | 290 | null | null | null | null | 388 | 422 | 4 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCAATCTCT-1_contig_2 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGATGGCTACAATGACCGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD5-12*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGATGGCTACAATGACCGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNTGGCTACNNNNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAREMATMTDAFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXATXXDAFDIWGQGTMVTVSS | 1 | 296 | 299.0 | 305.0 | 313 | 361 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | TGGCTAC | AT | TGGCTAC | AT | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGATGGCTACAATGACCGATGCTTTTGATATC | AREMATMTDAFDI | TGTGCGAGAGAGATGGCTACAATGACCGATGCTTTTGATATCTGG | 45.0 | CAREMATMTDAFDIW | 15.0 | 463.037 | 14.146 | 94.899 | 115S296M136S | 413S10N7M127S6N | 427S1N49M71S | 2.607e-132 | 13.51 | 1.441e-23 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 414.0 | 420.0 | 11.0 | 17.0 | 428 | 476 | 2 | 50 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 443.0 | 475.0 | 404.0 | 442.0 | GA | 2 | AATGACC | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'M', '109 ': 'A', '110 ': 'T', '111 ': 'M', '112 ': 'T', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCAATCTCT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ5*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGTATGGTAGCTCACCGATCACC | QQYGSSPIT | TGTCAGCAGTATGGTAGCTCACCGATCACCTTC | 33.0 | CQQYGSSPITF | 11.0 | 449.014 | null | 73.749 | 104S287M174S3N | null | 391S38M136S | 4.49e-128 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCACCTTAT-1_contig_1 | GGGGACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGGTCTACGTCTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-16*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGGTCTACGTCTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGNNNTACGTNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGLRLDAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXRXDAFDIWGQGTMVTVSS | 1 | 298 | 302.0 | 306.0 | 309 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TACGT | R | TACGT | R | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCCAGAGGTCTACGTCTTGATGCTTTTGATATC | ARGLRLDAFDI | TGTGCCAGAGGTCTACGTCTTGATGCTTTTGATATCTGG | 39.0 | CARGLRLDAFDIW | 13.0 | 466.153 | 10.301 | 96.822 | 96S298M131S1N | 397S10N5M123S22N | 404S50M71S | 2.879e-133 | 186.2 | 3.645e-24 | 100.0 | 100.0 | 100.0 | 97 | 394 | 1 | 298 | 398.0 | 402.0 | 11.0 | 15.0 | 405 | 454 | 1 | 50 | 97 | 171 | 172 | 201 | 202 | 252 | 253 | 273 | 274 | 387 | 421.0 | 453.0 | 388.0 | 420.0 | GTC | 3 | CT | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'L', '109 ': 'R', '110 ': 'L', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCACCTTAT-1_contig_2 | GGGGAAGCTCAGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGYVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXVVFGGGTKLTVL | 1 | 293 | null | null | 297 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGCTATGTGGTA | AAWDDSLSGYVV | TGTGCAGCATGGGATGACAGCCTGAGTGGCTATGTGGTATTC | 42.0 | CAAWDDSLSGYVVF | 14.0 | 458.363 | null | 73.749 | 113S293M252S3N | null | 409S38M211S | 8.037000000000005e-131 | null | 4.046e-17 | 100.0 | null | 100.0 | 114 | 406 | 1 | 293 | null | null | null | null | 410 | 447 | 1 | 38 | 114 | 188 | 189 | 212 | 213 | 263 | 264 | 272 | 273 | 380 | 417.0 | 446.0 | 381.0 | 416.0 | CTA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'S', '114 ': 'G', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCAGCAACT-1_contig_1 | TTTTATTTTTTGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCAGCGGAGGGATACTATGATGGTAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-22*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCAGCGGAGGGATACTATGATGGTAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGNNNNNNNNNNNTACTATGATAGTAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARAAEGYYDGNAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXYYDSNAFDIWGQGTMVTVSS | 1 | 298 | 310.0 | 322.0 | 323 | 370 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TACTATGATGGTA | YYDG | TACTATGATAGTA | YYDS | ATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | ATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCCAGAGCAGCGGAGGGATACTATGATGGTAATGCTTTTGATATC | ARAAEGYYDGNAFDI | TGTGCCAGAGCAGCGGAGGGATACTATGATGGTAATGCTTTTGATATCTGG | 51.0 | CARAAEGYYDGNAFDIW | 17.0 | 466.153 | 19.914 | 92.976 | 130S298M143S1N | 439S4N13M119S14N | 452S2N48M71S | 3.145e-133 | 0.2589 | 5.708e-23 | 100.0 | 92.308 | 100.0 | 131 | 428 | 1 | 298 | 440.0 | 452.0 | 5.0 | 17.0 | 453 | 500 | 3 | 50 | 131 | 205 | 206 | 235 | 236 | 286 | 287 | 307 | 308 | 421 | 467.0 | 499.0 | 422.0 | 466.0 | CAGCGGAGGGA | 11 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'A', '109 ': 'E', '110 ': 'G', '111 ': 'Y', '111A': 'Y', '112A': 'D', '112 ': 'G', '113 ': 'N', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCAGCAACT-1_contig_2 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ2*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGTGGTA | GTWDSSLSAVV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTC | 39.0 | CGTWDSSLSAVVF | 13.0 | 461.479 | null | 69.904 | 93S295M247S1N | null | 388S2N36M211S | 8.93e-132 | null | 5.609e-16 | 100.0 | null | 100.0 | 94 | 388 | 1 | 295 | null | null | null | null | 389 | 424 | 3 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCATCATTC-1_contig_1 | TGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTTGTATTTTCGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-10*02 | IGHJ4*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTTGTATTTTCGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNNNTATGTTCGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARLVFSDYFDYWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXCSDYFDYWGQGTLVTVSS | 1 | 298 | 302.0 | 310.0 | 311 | 358 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TATTTTCGG | FS | TATGTTCGG | CS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACTTGTATTTTCGGACTACTTTGACTAC | ARLVFSDYFDY | TGTGCGAGACTTGTATTTTCGGACTACTTTGACTACTGG | 39.0 | CARLVFSDYFDYW | 13.0 | 466.153 | 12.223 | 92.976 | 97S298M131S1N | 398S7N9M119S14N | 407S48M71S | 2.8849999999999998e-133 | 49.2 | 5.249e-23 | 100.0 | 88.889 | 100.0 | 98 | 395 | 1 | 298 | 399.0 | 407.0 | 8.0 | 16.0 | 408 | 455 | 1 | 48 | 98 | 172 | 173 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 422.0 | 454.0 | 389.0 | 421.0 | TTG | 3 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'L', '108 ': 'V', '109 ': 'F', '110 ': 'S', '113 ': 'D', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCATCATTC-1_contig_2 | GGGCCTTTTCTGGCCTGATCACCTGGGCATGGGCTGCTGAGAGCAGAAAGGGGAGGCAGATTGTCTCTGCAGCTGCAAGCCCAGCACCCGCCCCAGCTGCTTTGCATGTCCCTCCCAGCCGCCCTGCAGTCCAGAGCCCATATCAATGCCTGGGTCAGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ5*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGTATGGTAGCTCCCCGATCACC | QQYGSSPIT | TGTCAGCAGTATGGTAGCTCCCCGATCACCTTC | 33.0 | CQQYGSSPITF | 11.0 | 445.898 | null | 73.749 | 260S287M174S3N | null | 547S38M136S | 4.999e-127 | null | 4.44e-17 | 99.652 | null | 100.0 | 261 | 547 | 1 | 287 | null | null | null | null | 548 | 585 | 1 | 38 | 261 | 338 | 339 | 359 | 360 | 410 | 411 | 419 | 420 | 527 | 555.0 | 584.0 | 528.0 | 554.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCGATAGAA-1_contig_2 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGGTAGTATTACTATGGCTCACCGGTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGGTAGTATTACTATGGCTCACCGGTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNGTATTACTATGGNNNNNNNNNNCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVGSITMAHRFWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXITMXXXXWGQGTLVTVSS | 1 | 296 | 305.0 | 316.0 | 327 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GTATTACTATGG | ITM | GTATTACTATGG | ITM | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGTGGGTAGTATTACTATGGCTCACCGGTTC | ARVGSITMAHRF | TGTGCGAGGGTGGGTAGTATTACTATGGCTCACCGGTTCTGG | 42.0 | CARVGSITMAHRFW | 14.0 | 463.037 | 23.76 | 67.981 | 120S296M136S3N | 424S12M116S19N | 446S13N35M71S | 2.632e-132 | 0.0174 | 1.844e-15 | 100.0 | 100.0 | 100.0 | 121 | 416 | 1 | 296 | 425.0 | 436.0 | 1.0 | 12.0 | 447 | 481 | 14 | 48 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 448.0 | 480.0 | 412.0 | 447.0 | GGTGGGTA | 8 | CTCACCGGTT | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'G', '109 ': 'S', '110 ': 'I', '112 ': 'T', '113 ': 'M', '114 ': 'A', '115 ': 'H', '116 ': 'R', '117 ': 'F'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCGATAGAA-1_contig_1 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCCCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCCCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCCNGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHPVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHPVVFGGGTKLTVL | 1 | 290 | null | null | 292 | 328 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHP | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHP | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATCCCGTGGTA | QVWDSSSDHPVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATCCCGTGGTATTC | 42.0 | CQVWDSSSDHPVVF | 14.0 | 453.689 | null | 71.827 | 191S290M249S | null | 482S1N37M211S | 2.287e-129 | null | 1.705e-16 | 100.0 | null | 100.0 | 192 | 481 | 1 | 290 | null | null | null | null | 483 | 519 | 2 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 489.0 | 518.0 | 453.0 | 488.0 | C | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'S', '113 ': 'D', '114 ': 'H', '115 ': 'P', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCGCACTCT-1_contig_2 | CAATCTGTTAACGTGTTTTATTATTTGGGGACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCCAGCAACCGAGCAGCCATTCCCGTTGGGTGTACGATTTTTGGAGTGGTTACCGGCCCCCCGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD3-3*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCCAGCAACCGAGCAGCCATTCCCGTTGGGTGTACGATTTTTGGAGTGGTTACCGGCCCCCCGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGATTTTTGGAGTGGTTANNNNNNNNNNNGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGQQPSSHSRWVYDFWSGYRPPGFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGXXXXXXXXXXYDFWSGXXXXXFDPWGQGTLVTVSS | 1 | 296 | 328.0 | 347.0 | 359 | 403 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | TACGATTTTTGGAGTGGTTA | YDFWSG | TACGATTTTTGGAGTGGTTA | YDFWSG | GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCCAGCAACCGAGCAGCCATTCCCGTTGGGTGTACGATTTTTGGAGTGGTTACCGGCCCCCCGGGTTCGACCCC | ARGQQPSSHSRWVYDFWSGYRPPGFDP | TGTGCGAGAGGCCAGCAACCGAGCAGCCATTCCCGTTGGGTGTACGATTTTTGGAGTGGTTACCGGCCCCCCGGGTTCGACCCCTGG | 87.0 | CARGQQPSSHSRWVYDFWSGYRPPGFDPW | 29.0 | 463.037 | 39.141 | 87.208 | 142S296M178S | 469S4N20M127S7N | 500S6N45M71S | 2.9370000000000004e-132 | 4.558e-07 | 3.36e-21 | 100.0 | 100.0 | 100.0 | 143 | 438 | 1 | 296 | 470.0 | 489.0 | 5.0 | 24.0 | 501 | 545 | 7 | 51 | 143 | 217 | 218 | 241 | 242 | 292 | 293 | 316 | 317 | 430 | 512.0 | 544.0 | 431.0 | 511.0 | CCAGCAACCGAGCAGCCATTCCCGTTGGGTG | 31 | CCGGCCCCCCG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'Q', '109 ': 'Q', '110 ': 'P', '111 ': 'S', '111A': 'S', '111B': 'H', '111C': 'S', '111D': 'R', '111E': 'W', '111F': 'V', '111G': 'Y', '112G': 'D', '112F': 'F', '112E': 'W', '112D': 'S', '112C': 'G', '112B': 'Y', '112A': 'R', '112 ': 'P', '113 ': 'P', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCGCACTCT-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCCCCCCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ1*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCCCCCCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCNNNNNTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDPPYVFGTGTKVTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXXYVFGTGTKVTVL | 1 | 286 | null | null | 292 | 328 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGTGTGGGATAGTAGTAGTGATCCCCCCTATGTC | QVWDSSSDPPYV | TGTCAGGTGTGGGATAGTAGTAGTGATCCCCCCTATGTCTTC | 42.0 | CQVWDSSSDPPYVF | 14.0 | 447.456 | null | 71.827 | 97S286M253S4N | null | 388S1N37M211S | 1.4889999999999999e-127 | null | 1.482e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 389 | 425 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 395.0 | 424.0 | 359.0 | 394.0 | CCCCC | 5 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'S', '113 ': 'D', '114 ': 'P', '115 ': 'P', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCGGTCCGA-1_contig_1 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTAATACTCTACGGGTGGGGGGGAGGATTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | IGHD3-16*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTAATACTCTACGGGTGGGGGGGAGGATTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNNNGGGGGAGNNTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDLILYGWGGGFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXXXXXXGGXFDPWGQGTLVTVSS | 1 | 296 | 316.0 | 322.0 | 325 | 367 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | GGGGGAG | GG | GGGGGAG | GG | TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTAATACTCTACGGGTGGGGGGGAGGATTCGACCCC | ARDLILYGWGGGFDP | TGTGCGAGAGATCTAATACTCTACGGGTGGGGGGGAGGATTCGACCCCTGG | 51.0 | CARDLILYGWGGGFDPW | 17.0 | 463.037 | 14.146 | 83.363 | 115S296M142S | 430S17N7M116S13N | 439S8N43M71S | 2.637e-132 | 13.66 | 4.327e-20 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 431.0 | 437.0 | 18.0 | 24.0 | 440 | 482 | 9 | 51 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 449.0 | 481.0 | 404.0 | 448.0 | TCTAATACTCTACGGGTGG | 19 | GA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'I', '110 ': 'L', '111 ': 'Y', '111A': 'G', '112A': 'W', '112 ': 'G', '113 ': 'G', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCGGTCCGA-1_contig_2 | GGGGTCACAAGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGACACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-23*02 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSYVVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSXVVFGGGTKLTVL | 1 | 288 | null | null | 291 | 328 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGT | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGS | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGT | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGS | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGATGTTGGGAGTTATAACCTT | SSDVGSYNL | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | KRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGTAGTTATGTGGTA | CSYAGSYVV | TGCTGCTCATATGCAGGTAGTTATGTGGTATTC | 33.0 | CCSYAGSYVVF | 11.0 | 450.572 | null | 73.749 | 95S288M251S9N | null | 385S38M211S | 1.7120000000000002e-128 | null | 3.896e-17 | 100.0 | null | 100.0 | 96 | 383 | 1 | 288 | null | null | null | null | 386 | 423 | 1 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 393.0 | 422.0 | 366.0 | 392.0 | TA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'L'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '114 ': 'S', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGATGTCTTGTTTG-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGAACATTACTATGATAGTAGTGGTTATTATCAGGGTGTGGGTGTGGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGAACATTACTATGATAGTAGTGGTTATTATCAGGGTGTGGGTGTGGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNATTACTATGATAGTAGTGGTTATTANNNNNNNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREEHYYDSSGYYQGVGVGDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXYYDSSGYXXXXXXXDYWGQGTLVTVSS | 1 | 296 | 302.0 | 326.0 | 345 | 385 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | ATTACTATGATAGTAGTGGTTATTA | YYDSSGY | ATTACTATGATAGTAGTGGTTATTA | YYDSSGY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAAGAACATTACTATGATAGTAGTGGTTATTATCAGGGTGTGGGTGTGGGTGACTAC | AREEHYYDSSGYYQGVGVGDY | TGTGCGAGAGAAGAACATTACTATGATAGTAGTGGTTATTATCAGGGTGTGGGTGTGGGTGACTACTGG | 69.0 | CAREEHYYDSSGYYQGVGVGDYW | 23.0 | 463.037 | 48.755 | 79.518 | 136S296M160S | 437S2N25M130S4N | 480S7N41M71S | 2.817e-132 | 5.589e-10 | 6.667e-19 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 438.0 | 462.0 | 3.0 | 27.0 | 481 | 521 | 8 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | AGAAC | 5 | TCAGGGTGTGGGTGTGGG | 18.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'E', '109 ': 'H', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '111C': 'S', '111D': 'G', '112D': 'Y', '112C': 'Y', '112B': 'Q', '112A': 'G', '112 ': 'V', '113 ': 'G', '114 ': 'V', '115 ': 'G', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGATGTCTTGTTTG-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCCTCTCACT | QQRSNWPLT | TGTCAGCAGCGTAGCAACTGGCCTCTCACTTTC | 33.0 | CQQRSNWPLTF | 11.0 | 447.456 | null | 69.904 | 107S286M172S1N | null | 393S2N36M136S | 1.322e-127 | null | 4.98e-16 | 100.0 | null | 100.0 | 108 | 393 | 1 | 286 | null | null | null | null | 394 | 429 | 3 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAAGCGATCCC-1_contig_1 | GGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAGTACCATGACTACGGTGACTACGAGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD4-17*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAGTACCATGACTACGGTGACTACGAGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNTGACTACGGTGACTACNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTEYHDYGDYEFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXDYGDYXFDYWGQGTLVTVSS | 1 | 302 | 309.0 | 324.0 | 328 | 370 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | TGACTACGGTGACTAC | DYGDY | TGACTACGGTGACTAC | DYGDY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGAGTACCATGACTACGGTGACTACGAGTTTGACTAC | TTEYHDYGDYEFDY | TGTACCACAGAGTACCATGACTACGGTGACTACGAGTTTGACTACTGG | 48.0 | CTTEYHDYGDYEFDYW | 16.0 | 472.386 | 31.45 | 83.363 | 131S302M139S | 439S16M117S | 458S5N43M71S | 4.191e-135 | 8.734e-05 | 4.479e-20 | 100.0 | 100.0 | 100.0 | 132 | 433 | 1 | 302 | 440.0 | 455.0 | 1.0 | 16.0 | 459 | 501 | 6 | 48 | 132 | 206 | 207 | 230 | 231 | 281 | 282 | 311 | 312 | 425 | 468.0 | 500.0 | 426.0 | 467.0 | GTACCA | 6 | GAG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'E', '108 ': 'Y', '109 ': 'H', '110 ': 'D', '111 ': 'Y', '112A': 'G', '112 ': 'D', '113 ': 'Y', '114 ': 'E', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAAGCGATCCC-1_contig_2 | GAGATAAAAGCTCAGCTCTACCCTTGCCTTGACTGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-30*01 | null | IGKJ1*01 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPWTFGQGTKVEIK | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPWTFGQGTKVEIK | 1 | 302 | null | null | 303 | 340 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPP | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DVVMTQSPLSLPVTLGQPASISCRSS | CAAAGCCTCGTATACAGTGATGGAAACACCTAC | QSLVYSDGNTY | TTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTAT | LNWFQQRPGQSPRRLIY | AAGGTTTCT | KVS | AACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGGTACACACTGGCCTCCGTGGACG | MQGTHWPPWT | TGCATGCAAGGTACACACTGGCCTCCGTGGACGTTC | 36.0 | CMQGTHWPPWTF | 12.0 | 472.386 | null | 73.749 | 124S302M174S | null | 426S38M136S | 4.383e-135 | null | 3.683e-17 | 100.0 | null | 100.0 | 125 | 426 | 1 | 302 | null | null | null | null | 427 | 464 | 1 | 38 | 125 | 202 | 203 | 235 | 236 | 286 | 287 | 295 | 296 | 403 | 434.0 | 463.0 | 404.0 | 433.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'V', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'V', '31 ': 'Y', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'R', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'D', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'G', '108 ': 'T', '109 ': 'H', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAAGGACAGAA-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAAATACAGCTATGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAAATACAGCTATGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGANATACAGCTATGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARNTAMVDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXTAMVDYWGQGTLVTVSS | 1 | 294 | 296.0 | 307.0 | 308 | 349 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ATACAGCTATGG | TAM | ATACAGCTATGG | TAM | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAATACAGCTATGGTTGACTAC | ARNTAMVDY | TGTGCGAGAAATACAGCTATGGTTGACTACTGG | 33.0 | CARNTAMVDYW | 11.0 | 459.921 | 23.76 | 81.44 | 137S294M126S2N | 432S4N12M113S4N | 444S6N42M71S | 2.304e-131 | 0.01756 | 1.653e-19 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 433.0 | 444.0 | 5.0 | 16.0 | 445 | 486 | 7 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 453.0 | 485.0 | 426.0 | 452.0 | A | 1 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'N', '108 ': 'T', '109 ': 'A', '114 ': 'M', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAAGGACAGAA-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATTATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ3*02 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATTATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHYWVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHXWVFGGGTKLTVL | 1 | 288 | null | null | 291 | 328 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATTATTGGGTG | QVWDSSSDHYWV | TGTCAGGTGTGGGATAGTAGTAGTGATCATTATTGGGTGTTC | 42.0 | CQVWDSSSDHYWVF | 14.0 | 450.572 | null | 73.749 | 97S288M251S2N | null | 387S38M211S | 1.7170000000000002e-128 | null | 3.909e-17 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 388 | 425 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 395.0 | 424.0 | 359.0 | 394.0 | TA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'S', '113 ': 'D', '114 ': 'H', '115 ': 'Y', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAAGGTGGGTT-1_contig_2 | TGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGATATGCCTCCTTTATTGTGGTGGTGACTGGCCGGGGCTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD2-21*02 | IGHJ6*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGATATGCCTCCTTTATTGTGGTGGTGACTGGCCGGGGCTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGANNNNNNNNNNNTATTGTGGTGGTGACTGNNNNNNNNNCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAICLLYCGGDWPGLGMDVWGQGTTVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXYCGGDXXXXGMDVWGQGTTVTVSS | 1 | 295 | 307.0 | 323.0 | 333 | 378 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TATTGTGGTGGTGACTG | YCGGD | TATTGTGGTGGTGACTG | YCGGD | CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGATATGCCTCCTTTATTGTGGTGGTGACTGGCCGGGGCTCGGTATGGACGTC | AICLLYCGGDWPGLGMDV | TGTGCGATATGCCTCCTTTATTGTGGTGGTGACTGGCCGGGGCTCGGTATGGACGTCTGG | 60.0 | CAICLLYCGGDWPGLGMDVW | 20.0 | 461.479 | 33.373 | 89.131 | 96S295M155S4N | 402S4N17M127S7N | 428S16N46M72S | 7.662e-132 | 2.197e-05 | 7.838e-22 | 100.0 | 100.0 | 100.0 | 97 | 391 | 1 | 295 | 403.0 | 419.0 | 5.0 | 21.0 | 429 | 474 | 17 | 62 | 97 | 171 | 172 | 201 | 202 | 252 | 253 | 273 | 274 | 387 | 442.0 | 474.0 | 388.0 | 441.0 | TATGCCTCCTT | 11 | GCCGGGGCT | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'I', '107 ': 'C', '108 ': 'L', '109 ': 'L', '110 ': 'Y', '111 ': 'C', '111A': 'G', '111B': 'G', '112C': 'D', '112B': 'W', '112A': 'P', '112 ': 'G', '113 ': 'L', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAAGGTGGGTT-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGGGTKLTVL | 1 | 284 | null | null | 285 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGCGGTA | QAWDSSTAV | TGTCAGGCGTGGGACAGCAGCACTGCGGTATTC | 33.0 | CQAWDSSTAVF | 11.0 | 444.34 | null | 67.981 | 94S284M246S1N | null | 378S3N35M211S | 1.266e-126 | null | 2.089e-15 | 100.0 | null | 100.0 | 95 | 378 | 1 | 284 | null | null | null | null | 379 | 413 | 4 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'A', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACAATCCGAT-1_contig_1 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGCTTACTATAGAAGGTTAGAGTGGTTATTACTACCCAACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD3-22*01 | IGHJ6*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGCTTACTATAGAAGGTTAGAGTGGTTATTACTACCCAACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGNNNNNNNNNNNNNNNNNNAGTGGTTATTACTACNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATAYYRRLEWLLLPNYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXXXXXXXWLLLXXYYYYGMDVWGQGTTVTVSS | 1 | 295 | 314.0 | 328.0 | 332 | 390 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | AGTGGTTATTACTAC | WLLL | AGTGGTTATTACTAC | WLLL | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAACAGCTTACTATAGAAGGTTAGAGTGGTTATTACTACCCAACTACTACTACTACGGTATGGACGTC | ATAYYRRLEWLLLPNYYYYGMDV | TGTGCAACAGCTTACTATAGAAGGTTAGAGTGGTTATTACTACCCAACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CATAYYRRLEWLLLPNYYYYGMDVW | 25.0 | 461.479 | 29.528 | 114.126 | 117S295M167S1N | 430S16N15M134S | 448S3N59M72S | 8.104e-132 | 0.0003352 | 2.489e-29 | 100.0 | 100.0 | 100.0 | 118 | 412 | 1 | 295 | 431.0 | 445.0 | 17.0 | 31.0 | 449 | 507 | 4 | 62 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 475.0 | 507.0 | 406.0 | 474.0 | CTTACTATAGAAGGTTAG | 18 | CCA | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'A', '108 ': 'Y', '109 ': 'Y', '110 ': 'R', '111 ': 'R', '111A': 'L', '111B': 'E', '111C': 'W', '111D': 'L', '111E': 'L', '112E': 'L', '112D': 'P', '112C': 'N', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACAATCCGAT-1_contig_2 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ3*02 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGWVFGGGTKLTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGWVFGGGTKLTVL | 1 | 298 | null | null | 299 | 334 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCCTATGACAGCAGCCTGAGTGGTTGGGTG | QSYDSSLSGWV | TGCCAGTCCTATGACAGCAGCCTGAGTGGTTGGGTGTTC | 39.0 | CQSYDSSLSGWVF | 13.0 | 466.153 | null | 69.904 | 108S298M247S1N | null | 406S2N36M211S | 3.601e-133 | null | 5.771e-16 | 100.0 | null | 100.0 | 109 | 406 | 1 | 298 | null | null | null | null | 407 | 442 | 3 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 412.0 | 441.0 | 379.0 | 411.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACACCCTATC-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGCCGCACTTAGTGGGAGCTACTCACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD1-26*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGCCGCACTTAGTGGGAGCTACTCACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNTAGTGGGAGCTACTNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARAALSGSYSPDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXSGSYXXDYWGQGTLVTVSS | 1 | 295 | 303.0 | 316.0 | 321 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TAGTGGGAGCTACT | SGSY | TAGTGGGAGCTACT | SGSY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCCGCACTTAGTGGGAGCTACTCACCTGACTAC | ARAALSGSYSPDY | TGTGCGAGAGCCGCACTTAGTGGGAGCTACTCACCTGACTACTGG | 45.0 | CARAALSGSYSPDYW | 15.0 | 461.479 | 27.605 | 79.518 | 136S295M137S1N | 438S4N14M116S2N | 456S7N41M71S | 7.987000000000001e-132 | 0.001246 | 6.392e-19 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 439.0 | 452.0 | 5.0 | 18.0 | 457 | 497 | 8 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | CCGCACT | 7 | CACC | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'A', '109 ': 'L', '110 ': 'S', '111 ': 'G', '112 ': 'S', '113 ': 'Y', '114 ': 'S', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACACCCTATC-1_contig_1 | CCGATCCGCTCGTGGTGGTCTTATCTGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCTCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCTCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTSWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXWTFGQGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCTCGTGGACG | QQSYSTSWT | TGTCAACAGAGTTACAGTACCTCGTGGACGTTC | 33.0 | CQQSYSTSWTF | 11.0 | 441.224 | null | 73.749 | 120S282M176S5N | null | 404S38M136S | 1.0129999999999999e-125 | null | 3.546e-17 | 100.0 | null | 100.0 | 121 | 402 | 1 | 282 | null | null | null | null | 405 | 442 | 1 | 38 | 121 | 198 | 199 | 216 | 217 | 267 | 268 | 276 | 277 | 384 | 412.0 | 441.0 | 385.0 | 411.0 | TC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'S', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACACGAAATA-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTTATTCGGGACGGTTGGAGTGGTTATTATTGGAGGCCTCCGCCTGTATCCGAAGGCCGAAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD3-3*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTTATTCGGGACGGTTGGAGTGGTTATTATTGGAGGCCTCCGCCTGTATCCGAAGGCCGAAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNTTGGAGTGGTTATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDFIRDGWSGYYWRPPPVSEGRNAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXXWSGYYXXXXXXXXXXXAFDIWGQGTMVTVSS | 1 | 296 | 312.0 | 327.0 | 359 | 406 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TTGGAGTGGTTATTAT | WSGYY | TTGGAGTGGTTATTAT | WSGYY | ATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | ATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGATTTTATTCGGGACGGTTGGAGTGGTTATTATTGGAGGCCTCCGCCTGTATCCGAAGGCCGAAATGCTTTTGATATC | ARDFIRDGWSGYYWRPPPVSEGRNAFDI | TGTGCGAGAGATTTTATTCGGGACGGTTGGAGTGGTTATTATTGGAGGCCTCCGCCTGTATCCGAAGGCCGAAATGCTTTTGATATCTGG | 90.0 | CARDFIRDGWSGYYWRPPPVSEGRNAFDIW | 30.0 | 463.037 | 31.45 | 92.976 | 136S296M181S | 447S12N16M150S3N | 494S2N48M71S | 2.922e-132 | 9.371e-05 | 6.136e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 448.0 | 463.0 | 13.0 | 28.0 | 495 | 542 | 3 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 509.0 | 541.0 | 425.0 | 508.0 | TTTTATTCGGGACGG | 15 | TGGAGGCCTCCGCCTGTATCCGAAGGCCGAA | 31.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'F', '109 ': 'I', '110 ': 'R', '111 ': 'D', '111A': 'G', '111B': 'W', '111C': 'S', '111D': 'G', '111E': 'Y', '111F': 'Y', '111G': 'W', '112H': 'R', '112G': 'P', '112F': 'P', '112E': 'P', '112D': 'V', '112C': 'S', '112B': 'E', '112A': 'G', '112 ': 'R', '113 ': 'N', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACACGAAATA-1_contig_2 | GATCAGGACTTCTCAGTTCATCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2D-29*01 | null | IGKJ1*01 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPWTFGQGTKVEIK | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPWTFGQGTKVEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGT | DIVMTQTPLSLSVTPGQPASISCKSS | CAGAGCCTCCTGCATAGTGATGGAAAGACCTAT | QSLLHSDGKTY | TTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTAT | LYWYLQKPGQPPQLLIY | GAAGTTTCC | EVS | AACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAAGTATACAGCTTCCGTGGACG | MQSIQLPWT | TGCATGCAAAGTATACAGCTTCCGTGGACGTTC | 33.0 | CMQSIQLPWTF | 11.0 | 467.712 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 1.052e-133 | null | 3.452e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'K', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'S', '108 ': 'I', '109 ': 'Q', '114 ': 'L', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACACGCTTTC-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGTGAAAAGTATTACTATGATAGTAGTGGTTATTATTCTCATTTGGAACCGTCACCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGTGAAAAGTATTACTATGATAGTAGTGGTTATTATTCTCATTTGGAACCGTCACCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNGTATTACTATGATAGTAGTGGTTATTANNNNNNNNNNNNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCASEKYYYDSSGYYSHLEPSPFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXYYYDSSGYXXXXXXXXFDYWGQGTLVTVSS | 1 | 296 | 300.0 | 326.0 | 348 | 391 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGTGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTATTACTATGATAGTAGTGGTTATTA | YYYDSSGY | GTATTACTATGATAGTAGTGGTTATTA | YYYDSSGY | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTGAAAAGTATTACTATGATAGTAGTGGTTATTATTCTCATTTGGAACCGTCACCCTTTGACTAC | ASEKYYYDSSGYYSHLEPSPFDY | TGTGCGAGTGAAAAGTATTACTATGATAGTAGTGGTTATTATTCTCATTTGGAACCGTCACCCTTTGACTACTGG | 75.0 | CASEKYYYDSSGYYSHLEPSPFDYW | 25.0 | 459.921 | 52.6 | 85.286 | 136S296M166S | 435S27M136S4N | 483S4N44M71S | 2.4690000000000004e-131 | 3.928e-11 | 1.2360000000000001e-20 | 99.662 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 436.0 | 462.0 | 1.0 | 27.0 | 484 | 527 | 5 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 494.0 | 526.0 | 425.0 | 493.0 | AAA | 3 | TTCTCATTTGGAACCGTCACC | 21.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'E', '108 ': 'K', '109 ': 'Y', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '111C': 'S', '111D': 'G', '111E': 'Y', '112E': 'Y', '112D': 'S', '112C': 'H', '112B': 'L', '112A': 'E', '112 ': 'P', '113 ': 'S', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACACGCTTTC-1_contig_2 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ1*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGQGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPXTFGQGTKVEIK | 1 | 304 | null | null | 306 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAATATTATAGTACTCCTCTGACG | QQYYSTPLT | TGTCAGCAATATTATAGTACTCCTCTGACGTTC | 33.0 | CQQYYSTPLTF | 11.0 | 475.502 | null | 67.981 | 90S304M172S1N | null | 395S3N35M136S | 4.78e-136 | null | 1.891e-15 | 100.0 | null | 100.0 | 91 | 394 | 1 | 304 | null | null | null | null | 396 | 430 | 4 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACAGACAAGC-1_contig_1 | GAGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCTGTTACTATGATAGTAGTGGTTATTACCCAACCTGCCCGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCTGTTACTATGATAGTAGTGGTTATTACCCAACCTGCCCGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNTTACTATGATAGTAGTGGTTATTACNNNNNNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGCYYDSSGYYPTCPLDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXYYDSSGYYXXXXXDYWGQGTLVTVSS | 1 | 295 | 300.0 | 324.0 | 338 | 379 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | TTACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TTACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCTGTTACTATGATAGTAGTGGTTATTACCCAACCTGCCCGCTTGACTAC | ARGCYYDSSGYYPTCPLDY | TGTGCGAGAGGCTGTTACTATGATAGTAGTGGTTATTACCCAACCTGCCCGCTTGACTACTGG | 63.0 | CARGCYYDSSGYYPTCPLDYW | 21.0 | 461.479 | 48.755 | 81.44 | 121S295M155S1N | 420S3N25M126S3N | 458S6N42M71S | 8.032e-132 | 5.387e-10 | 1.695e-19 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 421.0 | 445.0 | 4.0 | 28.0 | 459 | 500 | 7 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 467.0 | 499.0 | 410.0 | 466.0 | GCTG | 4 | CCAACCTGCCCGC | 13.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'C', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '111A': 'S', '111B': 'S', '111C': 'G', '112C': 'Y', '112B': 'Y', '112A': 'P', '112 ': 'T', '113 ': 'C', '114 ': 'P', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACAGACAAGC-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 94S283M247S2N | null | 377S2N36M211S | 3.727e-126 | null | 5.51e-16 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 378 | 413 | 3 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACAGTTCCCT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGGGGTATAGTGGCTACGATTTTTAAGGCGGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGGGGTATAGTGGCTACGATTTTTAAGGCGGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGNNNTATAGTGGCTACGATTNNNNNNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGIVATIFKAGDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXIVATIXXXXDYWGQGTLVTVSS | 1 | 293 | 297.0 | 312.0 | 325 | 364 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | TATAGTGGCTACGATT | IVATI | TATAGTGGCTACGATT | IVATI | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGGTATAGTGGCTACGATTTTTAAGGCGGGGGACTAC | ARGIVATIFKAGDY | TGTGCGAGGGGTATAGTGGCTACGATTTTTAAGGCGGGGGACTACTGG | 48.0 | CARGIVATIFKAGDYW | 16.0 | 458.363 | 31.45 | 77.595 | 124S293M142S3N | 420S5N16M123S2N | 448S8N40M71S | 6.810000000000005e-131 | 8.532e-05 | 2.384e-18 | 100.0 | 100.0 | 100.0 | 125 | 417 | 1 | 293 | 421.0 | 436.0 | 6.0 | 21.0 | 449 | 488 | 9 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 455.0 | 487.0 | 413.0 | 454.0 | GGG | 3 | TTTAAGGCGGGG | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'I', '109 ': 'V', '110 ': 'A', '111 ': 'T', '112A': 'I', '112 ': 'F', '113 ': 'K', '114 ': 'A', '115 ': 'G', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACAGTTCCCT-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCTCTCACT | QQYDNLPLT | TGTCAACAGTATGATAATCTCCCTCTCACTTTC | 33.0 | CQQYDNLPLTF | 11.0 | 447.456 | null | 69.904 | 97S286M172S1N | null | 383S2N36M136S | 1.2979999999999998e-127 | null | 4.89e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 384 | 419 | 3 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAACATCCTTGC-1_contig_2 | TTTTCTAATCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAATTAACGTTCCACCGGCCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD3-16*01 | IGHJ3*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAATTAACGTTCCACCGGCCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAANNNACGTTNNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKLTFHRPDAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKXTXXXXDAFDIWGQGTMVTVSS | 1 | 294 | 298.0 | 302.0 | 312 | 361 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | ACGTT | T | ACGTT | T | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCAAAATTAACGTTCCACCGGCCTGATGCTTTTGATATC | AKLTFHRPDAFDI | TGTGCAAAATTAACGTTCCACCGGCCTGATGCTTTTGATATCTGG | 45.0 | CAKLTFHRPDAFDIW | 15.0 | 459.921 | 10.301 | 96.822 | 152S294M138S4N | 449S11N5M130S21N | 463S50M71S | 2.408e-131 | 207.5 | 4.063e-24 | 100.0 | 100.0 | 100.0 | 153 | 446 | 1 | 294 | 450.0 | 454.0 | 12.0 | 16.0 | 464 | 513 | 1 | 50 | 153 | 227 | 228 | 251 | 252 | 302 | 303 | 326 | 327 | 440 | 480.0 | 512.0 | 441.0 | 479.0 | TTA | 3 | CCACCGGCC | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'L', '108 ': 'T', '109 ': 'F', '110 ': 'H', '111 ': 'R', '112 ': 'P', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAACATCCTTGC-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCTTTCACT | QQSYSTPFT | TGTCAACAGAGTTACAGTACCCCTTTCACTTTC | 33.0 | CQQSYSTPFTF | 11.0 | 445.898 | null | 71.827 | 89S285M173S2N | null | 374S1N37M136S | 3.763e-127 | null | 1.271e-16 | 100.0 | null | 100.0 | 90 | 374 | 1 | 285 | null | null | null | null | 375 | 411 | 2 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAGTAAATGTG-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGAACTCACCATGGAGTTTGGACTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAACTCCCTAGAGATGGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-43*02 | IGHD5-12*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAACTCCCTAGAGATGGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAANNNNNNNNNNNTGGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCANSLEMAFDYWGQGTLVTVSS | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAXXXXXAFDYWGQGTLVTVSS | 1 | 293 | 305.0 | 309.0 | 310 | 352 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCA | TGGCT | A | TGGCT | A | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGVVQPGGSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTT | MHWVRQAPGKGLEWVSL | ATTAGTGGGGATGGTGGTAGCACA | ISGDGGST | TACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGT | YYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAACTCCCTAGAGATGGCTTTTGACTAC | ANSLEMAFDY | TGTGCAAACTCCCTAGAGATGGCTTTTGACTACTGG | 36.0 | CANSLEMAFDYW | 12.0 | 458.363 | 10.301 | 83.363 | 137S293M130S5N | 441S10N5M114S8N | 446S5N43M71S | 6.823e-131 | 198.8 | 4.383e-20 | 100.0 | 100.0 | 100.0 | 138 | 430 | 1 | 293 | 442.0 | 446.0 | 11.0 | 15.0 | 447 | 489 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 456.0 | 488.0 | 426.0 | 455.0 | CTCCCTAGAGA | 11 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'S', '108 ': 'L', '109 ': 'E', '113 ': 'M', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAGTAAATGTG-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACATCTCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACATCTCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACANNNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNISWVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNXXWVFGGGTKLTVL | 1 | 292 | null | null | 297 | 334 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACA | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACA | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSN | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACATCTCTTGGGTG | SSYAGSNISWV | TGCAGCTCATATGCAGGCAGCAACATCTCTTGGGTGTTC | 39.0 | CSSYAGSNISWVF | 13.0 | 456.805 | null | 73.749 | 98S292M253S5N | null | 394S38M211S | 2.31e-130 | null | 3.952e-17 | 100.0 | null | 100.0 | 99 | 390 | 1 | 292 | null | null | null | null | 395 | 432 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | TCTC | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '113 ': 'N', '114 ': 'I', '115 ': 'S', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAGTATAATGG-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATACCGCATACTATGATAGTAGTGGTTATTACGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATACCGCATACTATGATAGTAGTGGTTATTACGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNTACTATGATAGTAGTGGTTATTACNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDTAYYDSSGYYDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYYDSSGYYXYWGQGTLVTVSS | 1 | 296 | 304.0 | 327.0 | 331 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATACCGCATACTATGATAGTAGTGGTTATTACGATTAC | AKDTAYYDSSGYYDY | TGTGCGAAAGATACCGCATACTATGATAGTAGTGGTTATTACGATTACTGG | 51.0 | CAKDTAYYDSSGYYDYW | 17.0 | 463.037 | 46.832 | 71.827 | 136S296M142S | 439S4N24M111S3N | 466S11N37M71S | 2.727e-132 | 2.053e-09 | 1.335e-16 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 440.0 | 463.0 | 5.0 | 28.0 | 467 | 503 | 12 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | TACCGCA | 7 | GAT | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'T', '109 ': 'A', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '112A': 'S', '112 ': 'S', '113 ': 'G', '114 ': 'Y', '115 ': 'Y', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAGTATAATGG-1_contig_2 | AGTCAGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCAACTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ4*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCAACTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCNNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPQLTFGGGTKVEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXLTFGGGTKVEIK | 1 | 286 | null | null | 289 | 325 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGCTTAATAGTTACCCTCAACTCACT | QQLNSYPQLT | TGTCAACAGCTTAATAGTTACCCTCAACTCACTTTC | 36.0 | CQQLNSYPQLTF | 12.0 | 447.456 | null | 71.827 | 90S286M175S1N | null | 378S1N37M136S | 1.288e-127 | null | 1.28e-16 | 100.0 | null | 100.0 | 91 | 376 | 1 | 286 | null | null | null | null | 379 | 415 | 2 | 38 | 91 | 168 | 169 | 186 | 187 | 237 | 238 | 246 | 247 | 354 | 385.0 | 414.0 | 355.0 | 384.0 | AA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'Q', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAGTCCAGTAT-1_contig_1 | AAAGCAAGTCCAGTATTCAGCGCAACTCTTATATGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATGTCACGGATCGGGGTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD3-10*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATGTCACGGATCGGGGTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATNNNNNNNNTCGGGGNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDVTDRGYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXXRGYYYYGMDVWGQGTTVTVSS | 1 | 297 | 306.0 | 311.0 | 313 | 369 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | TCGGGG | RG | TCGGGG | RG | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATGTCACGGATCGGGGTTACTACTACTACGGTATGGACGTC | AKDVTDRGYYYYGMDV | TGTGCAAAAGATGTCACGGATCGGGGTTACTACTACTACGGTATGGACGTCTGG | 54.0 | CAKDVTDRGYYYYGMDVW | 18.0 | 464.595 | 12.223 | 110.281 | 175S297M144S1N | 480S13N6M130S12N | 487S5N57M72S | 9.975e-133 | 57.78 | 3.81e-28 | 100.0 | 100.0 | 100.0 | 176 | 472 | 1 | 297 | 481.0 | 486.0 | 14.0 | 19.0 | 488 | 544 | 6 | 62 | 176 | 250 | 251 | 274 | 275 | 325 | 326 | 349 | 350 | 463 | 512.0 | 544.0 | 464.0 | 511.0 | GTCACGGA | 8 | T | 1.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'V', '109 ': 'T', '110 ': 'D', '111 ': 'R', '111A': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAGTCCAGTAT-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGGAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ1*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGGAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTGVFGTGTKVTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTXVFGTGTKVTVL | 1 | 283 | null | null | 286 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGCGTGGGACAGCAGCACTGGAGTC | QAWDSSTGV | TGTCAGGCGTGGGACAGCAGCACTGGAGTCTTC | 33.0 | CQAWDSSTGVF | 11.0 | 442.782 | null | 66.059 | 94S283M247S2N | null | 379S4N34M211S | 3.727e-126 | null | 7.92e-15 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 380 | 413 | 5 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | GA | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAGTCCCTACT-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATAGTCTCCCTCCTGCGGGGTGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD1-26*01 | IGHJ5*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATAGTCTCCCTCCTGCGGGGTGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNNNNNNNNNGTGGGNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDSLPPAGWGWFDPWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXXXWXWFDPWGQGTLVTVSS | 1 | 302 | 321.0 | 325.0 | 327 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GTGGG | W | GTGGG | W | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGATAGTCTCCCTCCTGCGGGGTGGGGCTGGTTCGACCCC | TTDSLPPAGWGWFDP | TGTACCACAGATAGTCTCCCTCCTGCGGGGTGGGGCTGGTTCGACCCCTGG | 51.0 | CTTDSLPPAGWGWFDPW | 17.0 | 472.386 | 10.301 | 91.054 | 137S302M142S | 457S6N5M119S9N | 463S4N47M71S | 4.2369999999999997e-135 | 206.4 | 2.203e-22 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 458.0 | 462.0 | 7.0 | 11.0 | 464 | 510 | 5 | 51 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 477.0 | 509.0 | 432.0 | 476.0 | TAGTCTCCCTCCTGCGGG | 18 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'S', '109 ': 'L', '110 ': 'P', '111 ': 'P', '111A': 'A', '112A': 'G', '112 ': 'W', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAGTCCCTACT-1_contig_2 | GGGGTCACAAGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACTCTCCTCACTCAGGACACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCGGGTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-23*03 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCGGGTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCNNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTFGYVVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTFXXVVFGGGTKLTVL | 1 | 297 | null | null | 303 | 340 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTF | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTF | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGATGTTGGGAGTTATAACCTT | SSDVGSYNL | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGGCAGT | EGS | AAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | KRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGTAGTAGCACTTTCGGGTATGTGGTA | CSYAGSSTFGYVV | TGCTGCTCATATGCAGGTAGTAGCACTTTCGGGTATGTGGTATTC | 45.0 | CCSYAGSSTFGYVVF | 15.0 | 464.595 | null | 73.749 | 95S297M254S | null | 397S38M211S | 1.0480000000000001e-132 | null | 3.971e-17 | 100.0 | null | 100.0 | 96 | 392 | 1 | 297 | null | null | null | null | 398 | 435 | 1 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 405.0 | 434.0 | 366.0 | 404.0 | GGGTA | 5 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'L'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'G', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '111 ': 'S', '112 ': 'T', '113 ': 'F', '114 ': 'G', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAAGTTACTGAC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGGAAGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-10*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGGAAGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGGNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDREGYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDRXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 297.0 | 301.0 | 306 | 363 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TCGGG | R | TCGGG | R | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGATCGGGAAGGCTACTACTACTACGGTATGGACGTC | AKDREGYYYYGMDV | TGTGCGAAAGATCGGGAAGGCTACTACTACTACGGTATGGACGTCTGG | 48.0 | CAKDREGYYYYGMDVW | 16.0 | 463.037 | 10.301 | 112.203 | 137S296M139S | 433S13N5M134S13N | 442S4N58M72S | 2.7330000000000002e-132 | 203.2 | 9.319e-29 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 434.0 | 438.0 | 14.0 | 18.0 | 443 | 500 | 5 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 468.0 | 500.0 | 426.0 | 467.0 | null | 0 | AAGG | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'R', '109 ': 'E', '110 ': 'G', '111 ': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAAGTTACTGAC-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCNATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEIK | 1 | 284 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGTATGATAATCTCCCCATCACC | QQYDNLPIT | TGTCAACAGTATGATAATCTCCCCATCACCTTC | 33.0 | CQQYDNLPITF | 11.0 | 444.34 | null | 71.827 | 97S284M174S3N | null | 382S1N37M136S | 1.125e-126 | null | 1.29e-16 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 383 | 419 | 2 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAATCACAACGT-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCCCTAGGGAGCAGCTGGGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCCCTAGGGAGCAGCTGGGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNAGCAGCTGGNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDSLGSSWAFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXSSWXFDYWGQGTLVTVSS | 1 | 296 | 307.0 | 315.0 | 318 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGCAGCTGG | SSW | AGCAGCTGG | SSW | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATTCCCTAGGGAGCAGCTGGGCCTTTGACTAC | ARDSLGSSWAFDY | TGTGCGAGAGATTCCCTAGGGAGCAGCTGGGCCTTTGACTACTGG | 45.0 | CARDSLGSSWAFDYW | 15.0 | 463.037 | 17.992 | 85.286 | 136S296M136S | 442S9N9M117S3N | 453S4N44M71S | 2.7120000000000002e-132 | 0.9763 | 1.173e-20 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 443.0 | 451.0 | 10.0 | 18.0 | 454 | 497 | 5 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | TTCCCTAGGG | 10 | GC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'S', '109 ': 'L', '110 ': 'G', '111 ': 'S', '112 ': 'S', '113 ': 'W', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAATCACAACGT-1_contig_2 | AGGAGTCAGACCCTGTCAGGACACAGCATAGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCTACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-8*01 | null | IGKJ4*01 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCTACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCNACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPPTFGGGTKVEIK | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPPTFGGGTKVEIK | 1 | 287 | null | null | 289 | 322 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPP | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPP | null | null | null | null | ACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | ACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | AIRMTQSPSSFSASTGDRVTITCRAS | CAGGGTATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATTATAGTTACCCTCCTACT | QQYYSYPPT | TGTCAACAGTATTATAGTTACCCTCCTACTTTC | 33.0 | CQQYYSYPPTF | 11.0 | 449.014 | null | 66.059 | 93S287M171S | null | 381S4N34M136S | 4.3730000000000004e-128 | null | 6.977e-15 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 382 | 415 | 5 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'R', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'F', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAATCAGATAAG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATGGGGGTGACCCGTTCTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD2-21*02 | IGHJ1*01 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATGGGGGTGACCCGTTCTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATGGTGGTGACNNNNNCTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDGGDPFFQHWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDGGDXXFQHWGQGTLVTVSS | 1 | 296 | 297.0 | 306.0 | 312 | 355 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | TGGGGGTGAC | GGD | TGGTGGTGAC | GGD | CTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | FQHWGQGTLVTVSS | CTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | FQHWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGCACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATGGGGGTGACCCGTTCTTCCAGCAC | ARDGGDPFFQH | TGTGCGAGAGATGGGGGTGACCCGTTCTTCCAGCACTGG | 39.0 | CARDGGDPFFQHW | 13.0 | 463.037 | 14.146 | 85.286 | 121S296M130S | 417S9N10M120S9N | 432S8N44M71S | 2.607e-132 | 13.51 | 1.1290000000000001e-20 | 100.0 | 90.0 | 100.0 | 122 | 417 | 1 | 296 | 418.0 | 427.0 | 10.0 | 19.0 | 433 | 476 | 9 | 52 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 443.0 | 475.0 | 410.0 | 442.0 | null | 0 | CCGTT | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'G', '110 ': 'D', '113 ': 'P', '114 ': 'F', '115 ': 'F', '116 ': 'Q', '117 ': 'H'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAATCAGATAAG-1_contig_1 | GCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ4*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPALTFGGGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPXLTFGGGTKVEIK | 1 | 285 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCT | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCT | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATAATAACTGGCCTGCGCTCACT | QQYNNWPALT | TGTCAGCAGTATAATAACTGGCCTGCGCTCACTTTC | 36.0 | CQQYNNWPALTF | 12.0 | 445.898 | null | 73.749 | 113S285M176S2N | null | 400S38M136S | 3.937e-127 | null | 3.521e-17 | 100.0 | null | 100.0 | 114 | 398 | 1 | 285 | null | null | null | null | 401 | 438 | 1 | 38 | 114 | 191 | 192 | 209 | 210 | 260 | 261 | 269 | 270 | 377 | 408.0 | 437.0 | 378.0 | 407.0 | GC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'A', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAATCCTTTCGG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGAGTTATAGCAGTGGCTGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGAGTTATAGCAGTGGCTGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNTATAGCAGTGGCTGNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGVIAVAADYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXIAVAXDYWGQGTLVTVSS | 1 | 295 | 300.0 | 313.0 | 316 | 355 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | TATAGCAGTGGCTG | IAVA | TATAGCAGTGGCTG | IAVA | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAGTTATAGCAGTGGCTGCCGACTAC | ARGVIAVAADY | TGTGCGAGAGGAGTTATAGCAGTGGCTGCCGACTACTGG | 39.0 | CARGVIAVAADYW | 13.0 | 461.479 | 27.605 | 77.595 | 121S295M131S1N | 420S3N14M113S4N | 436S8N40M71S | 7.677000000000001e-132 | 0.0012 | 2.332e-18 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 421.0 | 434.0 | 4.0 | 17.0 | 437 | 476 | 9 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 443.0 | 475.0 | 410.0 | 442.0 | GAGT | 4 | CC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'V', '109 ': 'I', '110 ': 'A', '113 ': 'V', '114 ': 'A', '115 ': 'A', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAATCCTTTCGG-1_contig_1 | GGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXLTFGGGTKVEIK | 1 | 283 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGAGTTACAGTACCCTGCTCACT | QQSYSTLLT | TGTCAACAGAGTTACAGTACCCTGCTCACTTTC | 33.0 | CQQSYSTLLTF | 11.0 | 442.782 | null | 73.749 | 97S283M175S4N | null | 381S38M136S | 3.313e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 380 | 1 | 283 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAATCTTAGAGC-1_contig_1 | TGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATATGCAGTGGTGGTAGCTGCTATTGGGCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD2-15*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATATGCAGTGGTGGTAGCTGCTATTGGGCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATANNNNNAGTGGTGGTAGCTGCTANNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDICSGGSCYWALDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXSGGSCXXXXDYWGQGTLVTVSS | 1 | 298 | 304.0 | 320.0 | 329 | 370 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | AGTGGTGGTAGCTGCTA | SGGSC | AGTGGTGGTAGCTGCTA | SGGSC | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAAAGATATATGCAGTGGTGGTAGCTGCTATTGGGCCCTTGACTAC | AKDICSGGSCYWALDY | TGTGCAAAAGATATATGCAGTGGTGGTAGCTGCTATTGGGCCCTTGACTACTGG | 54.0 | CAKDICSGGSCYWALDYW | 18.0 | 466.153 | 33.373 | 81.44 | 141S298M143S | 444S10N17M121S4N | 469S6N42M71S | 3.1909999999999996e-133 | 2.345e-05 | 1.728e-19 | 100.0 | 100.0 | 100.0 | 142 | 439 | 1 | 298 | 445.0 | 461.0 | 11.0 | 27.0 | 470 | 511 | 7 | 48 | 142 | 216 | 217 | 240 | 241 | 291 | 292 | 315 | 316 | 429 | 478.0 | 510.0 | 430.0 | 477.0 | TATGC | 5 | TTGGGCCC | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'I', '109 ': 'C', '110 ': 'S', '111 ': 'G', '111A': 'G', '112B': 'S', '112A': 'C', '112 ': 'Y', '113 ': 'W', '114 ': 'A', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAATCTTAGAGC-1_contig_2 | GGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCCCCGTGGACG | QQYNNWPPWT | TGTCAGCAGTATAATAACTGGCCCCCGTGGACGTTC | 36.0 | CQQYNNWPPWTF | 12.0 | 445.898 | null | 73.749 | 95S287M174S | null | 382S38M136S | 3.828e-127 | null | 3.408e-17 | 99.652 | null | 100.0 | 96 | 382 | 1 | 287 | null | null | null | null | 383 | 420 | 1 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 390.0 | 419.0 | 360.0 | 389.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGCAATCTTTAGTC-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCATTACTATGATAGTAGTGGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCATTACTATGATAGTAGTGGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNATTACTATGATAGTAGTGGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDHYYDSSGYFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXYYDSSGYFDYWGQGTLVTVSS | 1 | 296 | 299.0 | 321.0 | 322 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACCATTACTATGATAGTAGTGGTTATTTTGACTAC | ARDHYYDSSGYFDY | TGTGCGAGAGACCATTACTATGATAGTAGTGGTTATTTTGACTACTGG | 48.0 | CARDHYYDSSGYFDYW | 16.0 | 463.037 | 44.909 | 83.363 | 121S296M139S | 419S2N23M114S6N | 442S5N43M71S | 2.652e-132 | 7.536e-09 | 4.3510000000000005e-20 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 420.0 | 442.0 | 3.0 | 25.0 | 443 | 485 | 6 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 452.0 | 484.0 | 410.0 | 451.0 | CC | 2 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'H', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '112A': 'S', '112 ': 'S', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGCAATCTTTAGTC-1_contig_1 | ACTGCGGGGGTAAGAGGTTGTGTCCACCATGGCCTGGACTCCTCTCCTCCTCCTGTTCCTCTCTCACTGCACAGGTTCCCTCTCGCAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV5-45*03 | null | IGLJ1*01 | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSAWVFGTGTKVTVL | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSAXVFGTGTKVTVL | 1 | 310 | null | null | 313 | 346 | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTT | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSA | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTT | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSA | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTGCGC | QAVLTQPSSLSASPGASASLTCTLR | AGTGGCATCAATGTTGGTACCTACAGG | SGINVGTYR | ATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGG | IYWYQQKPGSPPQYLLR | TACAAATCAGACTCAGATAAG | YKSDSDK | CAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGT | QQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | ATGATTTGGCACAGCAGCGCTTGGGTC | MIWHSSAWV | TGTATGATTTGGCACAGCAGCGCTTGGGTCTTC | 33.0 | CMIWHSSAWVF | 11.0 | 484.851 | null | 66.059 | 85S310M247S2N | null | 397S4N34M211S | 8.321999999999999e-139 | null | 8.153e-15 | 100.0 | null | 100.0 | 86 | 395 | 1 | 310 | null | null | null | null | 398 | 431 | 5 | 38 | 86 | 160 | 161 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 401.0 | 430.0 | 374.0 | 400.0 | GG | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'S', '9 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'A', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'L', '26 ': 'R'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'I', '30 ': 'N', '31 ': 'V', '35 ': 'G', '36 ': 'T', '37 ': 'Y', '38 ': 'R'}, 'fwl2': {'39 ': 'I', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'Y', '53 ': 'L', '54 ': 'L', '55 ': 'R'}, 'cdrl2': {'56 ': 'Y', '57 ': 'K', '58 ': 'S', '59 ': 'D', '63 ': 'S', '64 ': 'D', '65 ': 'K'}, 'fwl3': {'66 ': 'Q', '67 ': 'Q', '68 ': 'G', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '81 ': 'D', '82 ': 'A', '83 ': 'S', '84 ': 'A', '85 ': 'N', '86 ': 'A', '87 ': 'G', '88 ': 'I', '89 ': 'L', '90 ': 'L', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'M', '106 ': 'I', '107 ': 'W', '108 ': 'H', '109 ': 'S', '114 ': 'S', '115 ': 'A', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGAGCGATCCC-1_contig_1 | GGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAGTGCGACGAGATGGCTACAATTAATCGGTGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD5-12*01 | IGHJ3*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAGTGCGACGAGATGGCTACAATTAATCGGTGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAANNNNNNNNNNNTGGCTACGATTANNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKCDEMATINRCAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAXXXXXATIXXXAFDIWGQGTMVTVSS | 1 | 293 | 305.0 | 316.0 | 324 | 370 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCA | TGGCTACAATTA | ATI | TGGCTACGATTA | ATI | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCAAAGTGCGACGAGATGGCTACAATTAATCGGTGTGCTTTTGATATC | AKCDEMATINRCAFDI | TGTGCAAAGTGCGACGAGATGGCTACAATTAATCGGTGTGCTTTTGATATCTGG | 54.0 | CAKCDEMATINRCAFDIW | 18.0 | 458.363 | 17.992 | 91.054 | 132S293M148S5N | 436S10N12M125S1N | 455S3N47M71S | 6.951e-131 | 0.9851 | 2.1719999999999997e-22 | 100.0 | 91.667 | 100.0 | 133 | 425 | 1 | 293 | 437.0 | 448.0 | 11.0 | 22.0 | 456 | 502 | 4 | 50 | 133 | 207 | 208 | 231 | 232 | 282 | 283 | 306 | 307 | 420 | 469.0 | 501.0 | 421.0 | 468.0 | GTGCGACGAGA | 11 | ATCGGTG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'C', '108 ': 'D', '109 ': 'E', '110 ': 'M', '111 ': 'A', '111A': 'T', '112B': 'I', '112A': 'N', '112 ': 'R', '113 ': 'C', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGAGCGATCCC-1_contig_2 | TGGGGGCTGGGATCTCAGGAGGCAGCTCTCTCGGAATATCTCCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGATCCTGGGCTCAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTAGTTATAACCGTGTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTTATATACAAGCAGCAGCACTTTCGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-18*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTAGTTATAACCGTGTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTTATATACAAGCAGCAGCACTTTCGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTAGTTATAACCGTGTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTTATATACAAGCAGCAGCACTTTCNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSVSGSPGQSVTISCTGTSSDVGSYNRVSWYQQPPGTAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSLYTSSSTFGVVFGGGTKLTVL | QSALTQPPSVSGSPGQSVTISCTGTSSDVGSYNRVSWYQQPPGTAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSLYTSSSTFXVVFGGGTKLTVL | 1 | 297 | null | null | 300 | 337 | CAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTAGTTATAACCGTGTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTTATATACAAGCAGCAGCACTTTC | QSALTQPPSVSGSPGQSVTISCTGTSSDVGSYNRVSWYQQPPGTAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSLYTSSSTF | CAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTAGTTATAACCGTGTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTTATATACAAGCAGCAGCACTTTC | QSALTQPPSVSGSPGQSVTISCTGTSSDVGSYNRVSWYQQPPGTAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSLYTSSSTF | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSVSGSPGQSVTISCTGT | AGCAGTGACGTTGGTAGTTATAACCGT | SSDVGSYNR | GTCTCCTGGTACCAGCAGCCCCCAGGCACAGCCCCCAAACTCATGATTTAT | VSWYQQPPGTAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGGTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTTATATACAAGCAGCAGCACTTTCGGTGTGGTA | SLYTSSSTFGVV | TGCAGCTTATATACAAGCAGCAGCACTTTCGGTGTGGTATTC | 42.0 | CSLYTSSSTFGVVF | 14.0 | 464.595 | null | 73.749 | 103S297M251S | null | 402S38M211S | 1.057e-132 | null | 4.002e-17 | 100.0 | null | 100.0 | 104 | 400 | 1 | 297 | null | null | null | null | 403 | 440 | 1 | 38 | 104 | 178 | 179 | 205 | 206 | 256 | 257 | 265 | 266 | 373 | 410.0 | 439.0 | 374.0 | 409.0 | GG | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'R'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'L', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '112 ': 'S', '113 ': 'T', '114 ': 'F', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGAGCGTAGTG-1_contig_1 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTTGCACGGCACATTACTATGATAGTACGGCGACGGGGATGGGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTTGCACGGCACATTACTATGATAGTACGGCGACGGGGATGGGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTNNNNNNNNNNATTACTATGATAGTANNNNNNNNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCCTAHYYDSTATGMGFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCXXXXYYDSXXXXXXFDYWGQGTLVTVSS | 1 | 288 | 299.0 | 313.0 | 331 | 373 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | ATTACTATGATAGTA | YYDS | ATTACTATGATAGTA | YYDS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | TGCACGGCACATTACTATGATAGTACGGCGACGGGGATGGGTTTTGACTAC | CTAHYYDSTATGMGFDY | TGTTGCACGGCACATTACTATGATAGTACGGCGACGGGGATGGGTTTTGACTACTGG | 57.0 | CCTAHYYDSTATGMGFDYW | 19.0 | 450.572 | 29.528 | 83.363 | 117S288M156S8N | 415S2N15M131S14N | 447S5N43M71S | 1.5140000000000002e-128 | 0.0003246 | 4.3910000000000006e-20 | 100.0 | 100.0 | 100.0 | 118 | 405 | 1 | 288 | 416.0 | 430.0 | 3.0 | 17.0 | 448 | 490 | 6 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 457.0 | 489.0 | 406.0 | 456.0 | TGCACGGCAC | 10 | CGGCGACGGGGATGGGT | 17.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'C', '106 ': 'T', '107 ': 'A', '108 ': 'H', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '111A': 'S', '111B': 'T', '112B': 'A', '112A': 'T', '112 ': 'G', '113 ': 'M', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGAGCGTAGTG-1_contig_2 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ2*01 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVL | 1 | 299 | null | null | 300 | 334 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTC | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGS | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTC | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGS | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCCTATGACAGCAGCCTGAGTGGTTCGGTA | QSYDSSLSGSV | TGCCAGTCCTATGACAGCAGCCTGAGTGGTTCGGTATTC | 39.0 | CQSYDSSLSGSVF | 13.0 | 467.712 | null | 67.981 | 108S299M246S | null | 407S3N35M211S | 1.2229999999999999e-133 | null | 2.188e-15 | 100.0 | null | 100.0 | 109 | 407 | 1 | 299 | null | null | null | null | 408 | 442 | 4 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 412.0 | 441.0 | 379.0 | 411.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'S', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGAGCGTTCCG-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCCAGGGACGATGGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*04 | IGHD3-3*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCCAGGGACGATGGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNACGATNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARGQGRWVDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARXXXRXXDYWGQGTLVTVSS | 1 | 292 | 300.0 | 304.0 | 308 | 349 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | ACGAT | R | ACGAT | R | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCCAGGGACGATGGGTTGACTAC | ARGQGRWVDY | TGTGCGAGAGGCCAGGGACGATGGGTTGACTACTGG | 36.0 | CARGQGRWVDYW | 12.0 | 456.805 | 10.301 | 81.44 | 130S292M128S1N | 429S5N5M116S21N | 437S6N42M71S | 1.9709999999999998e-130 | 195.2 | 1.631e-19 | 100.0 | 100.0 | 100.0 | 131 | 422 | 1 | 292 | 430.0 | 434.0 | 6.0 | 10.0 | 438 | 479 | 7 | 48 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 446.0 | 478.0 | 416.0 | 445.0 | GCCAGGG | 7 | GGG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'H', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'Q', '109 ': 'G', '113 ': 'R', '114 ': 'W', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGAGCGTTCCG-1_contig_1 | AGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXWTFGQGTKVEIK | 1 | 283 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCTGTGGACG | QQSYSTLWT | TGTCAACAGAGTTACAGTACCCTGTGGACGTTC | 33.0 | CQQSYSTLWTF | 11.0 | 442.782 | null | 73.749 | 93S283M175S4N | null | 377S38M136S | 3.288e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGAGTCATCCA-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAGATATACAGCTATGGCCCACCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAGATATACAGCTATGGCCCACCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNATACAGCTATGGNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREIYSYGPPDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXYSYGXXDYWGQGTLVTVSS | 1 | 293 | 297.0 | 308.0 | 316 | 355 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | ATACAGCTATGG | YSYG | ATACAGCTATGG | YSYG | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGATATACAGCTATGGCCCACCGGACTAC | AREIYSYGPPDY | TGTGCGAGAGAGATATACAGCTATGGCCCACCGGACTACTGG | 42.0 | CAREIYSYGPPDYW | 14.0 | 458.363 | 23.76 | 77.595 | 94S293M133S | 390S4N12M118S4N | 409S8N40M71S | 6.309999999999999e-131 | 0.01637 | 2.215e-18 | 100.0 | 100.0 | 100.0 | 95 | 387 | 1 | 293 | 391.0 | 402.0 | 5.0 | 16.0 | 410 | 449 | 9 | 48 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 416.0 | 448.0 | 380.0 | 415.0 | GAT | 3 | CCCACCG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'I', '109 ': 'Y', '110 ': 'S', '112 ': 'Y', '113 ': 'G', '114 ': 'P', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGAGTCATCCA-1_contig_2 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGRVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGRVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGTCGGGTG | AAWDDSLSGRV | TGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTGTTC | 39.0 | CAAWDDSLSGRVF | 13.0 | 461.479 | null | 69.904 | 103S295M247S1N | null | 398S2N36M211S | 9.077e-132 | null | 5.699e-16 | 100.0 | null | 100.0 | 104 | 398 | 1 | 295 | null | null | null | null | 399 | 434 | 3 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 404.0 | 433.0 | 371.0 | 403.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGAGTGTCCCG-1_contig_1 | GAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCCCTGAGGACCTTTGAGGGGGATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-16*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCCCTGAGGACCTTTGAGGGGGATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGNNNNNNNNNNNNNNNNGGGGGATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARALRTFEGDYYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXXGDYYYYYGMDVWGQGTTVTVSS | 1 | 298 | 315.0 | 319.0 | 320 | 381 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGGGG | G | GGGGG | G | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCCAGAGCCCTGAGGACCTTTGAGGGGGATTACTACTACTACTACGGTATGGACGTC | ARALRTFEGDYYYYYGMDV | TGTGCCAGAGCCCTGAGGACCTTTGAGGGGGATTACTACTACTACTACGGTATGGACGTCTGG | 63.0 | CARALRTFEGDYYYYYGMDVW | 21.0 | 466.153 | 10.301 | 119.894 | 116S298M155S1N | 430S17N5M134S15N | 435S62M72S | 3.1339999999999997e-133 | 202.1 | 4.486e-31 | 100.0 | 100.0 | 100.0 | 117 | 414 | 1 | 298 | 431.0 | 435.0 | 18.0 | 22.0 | 436 | 497 | 1 | 62 | 117 | 191 | 192 | 221 | 222 | 272 | 273 | 293 | 294 | 407 | 465.0 | 497.0 | 408.0 | 464.0 | CCCTGAGGACCTTTGA | 16 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'L', '109 ': 'R', '110 ': 'T', '111 ': 'F', '111A': 'E', '111B': 'G', '111C': 'D', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGAGTGTCCCG-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCTATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ5*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCTATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPITFGQGTRLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPITFGQGTRLEIK | 1 | 300 | null | null | 301 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | ATGCAAGCTCTACAAACCCCTATCACC | MQALQTPIT | TGCATGCAAGCTCTACAAACCCCTATCACCTTC | 33.0 | CMQALQTPITF | 11.0 | 466.153 | null | 71.827 | 90S300M173S2N | null | 390S1N37M136S | 3.0989999999999997e-133 | null | 1.309e-16 | 99.667 | null | 100.0 | 91 | 390 | 1 | 300 | null | null | null | null | 391 | 427 | 2 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGCACTGCCAG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCGGGAGATTACGATTTTTGGAGTGGTTACCTAGGCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD3-3*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGCGGGAGATTACGATTTTTGGAGTGGTTACCTAGGCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNATTACGATTTTTGGAGTGGTTANNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGRLRFLEWLPRPFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXLRFLEWLXXXFDYWGQGTLVTVSS | 1 | 295 | 303.0 | 324.0 | 334 | 376 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | ATTACGATTTTTGGAGTGGTTA | LRFLEWL | ATTACGATTTTTGGAGTGGTTA | LRFLEWL | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCGGGAGATTACGATTTTTGGAGTGGTTACCTAGGCCGTTTGACTAC | ARGGRLRFLEWLPRPFDY | TGTGCGAGAGGCGGGAGATTACGATTTTTGGAGTGGTTACCTAGGCCGTTTGACTACTGG | 60.0 | CARGGRLRFLEWLPRPFDYW | 20.0 | 461.479 | 42.986 | 83.363 | 121S295M152S1N | 423S2N22M123S7N | 454S5N43M71S | 7.987000000000001e-132 | 2.92e-08 | 4.4470000000000005e-20 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 424.0 | 445.0 | 3.0 | 24.0 | 455 | 497 | 6 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 464.0 | 496.0 | 410.0 | 463.0 | GCGGGAG | 7 | CCTAGGCCG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'R', '110 ': 'L', '111 ': 'R', '111A': 'F', '111B': 'L', '112C': 'E', '112B': 'W', '112A': 'L', '112 ': 'P', '113 ': 'R', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGCACTGCCAG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYWTFGQGTKVEIK | 1 | 283 | null | null | 284 | 319 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTGGACG | QQYNSYWT | TGCCAACAGTATAATAGTTATTGGACGTTC | 30.0 | CQQYNSYWTF | 10.0 | 442.782 | null | 69.904 | 93S283M172S4N | null | 376S2N36M136S | 3.269e-126 | null | 4.827e-16 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 377 | 412 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 382.0 | 411.0 | 358.0 | 381.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'S', '115 ': 'Y', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGCATACAGCT-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATAAAGGTATAGCAGTGGCTTCGCCGGGCTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD6-19*01 | IGHJ2*01 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATAAAGGTATAGCAGTGGCTTCGCCGGGCTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNGGTATAGCAGTGGCTNNNNNNNNNTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDKGIAVASPGYFDLWGRGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXGIAVAXXXYFDLWGRGTLVTVSS | 1 | 296 | 301.0 | 315.0 | 325 | 370 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | GGTATAGCAGTGGCT | GIAVA | GGTATAGCAGTGGCT | GIAVA | TACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | YFDLWGRGTLVTVSS | TACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | YFDLWGRGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAGAGATAAAGGTATAGCAGTGGCTTCGCCGGGCTACTTCGATCTC | ARDKGIAVASPGYFDL | TGTGCGAGAGATAAAGGTATAGCAGTGGCTTCGCCGGGCTACTTCGATCTCTGG | 54.0 | CARDKGIAVASPGYFDLW | 18.0 | 463.037 | 29.528 | 89.131 | 121S296M145S | 421S1N15M126S5N | 445S7N46M71S | 2.682e-132 | 0.0003252 | 8.071999999999999e-22 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 422.0 | 436.0 | 2.0 | 16.0 | 446 | 491 | 8 | 53 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 458.0 | 490.0 | 410.0 | 457.0 | TAAA | 4 | TCGCCGGGC | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'K', '109 ': 'G', '110 ': 'I', '111 ': 'A', '111A': 'V', '112B': 'A', '112A': 'S', '112 ': 'P', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGCATACAGCT-1_contig_1 | TGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATGATAATCTCCCGTACACT | QQYDNLPYT | TGTCAACAGTATGATAATCTCCCGTACACTTTT | 33.0 | CQQYDNLPYTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S1N38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 2 | 39 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGCATGTCGAT-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACGGTTTGTCATAGCGACTGGAACTACGACCTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD1-7*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACGGTTTGTCATAGCGACTGGAACTACGACCTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGANNNNNNNNNNNNNNNACTGGAACTACNNNNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARRFVIATGTTTYYYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXTGTTXXYYYYYGMDVWGQGTTVTVSS | 1 | 294 | 310.0 | 320.0 | 326 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | ACTGGAACTAC | TGTT | ACTGGAACTAC | TGTT | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGACGGTTTGTCATAGCGACTGGAACTACGACCTATTACTACTACTACTACGGTATGGACGTC | ARRFVIATGTTTYYYYYYGMDV | TGTGCGAGACGGTTTGTCATAGCGACTGGAACTACGACCTATTACTACTACTACTACGGTATGGACGTCTGG | 72.0 | CARRFVIATGTTTYYYYYYGMDVW | 24.0 | 459.921 | 21.837 | 119.894 | 136S294M165S2N | 445S6N11M139S | 461S62M72S | 2.4560000000000004e-131 | 0.07121 | 4.695000000000001e-31 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 446.0 | 456.0 | 7.0 | 17.0 | 462 | 523 | 1 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 491.0 | 523.0 | 425.0 | 490.0 | CGGTTTGTCATAGCG | 15 | GACCT | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'F', '109 ': 'V', '110 ': 'I', '111 ': 'A', '111A': 'T', '111B': 'G', '111C': 'T', '111D': 'T', '112E': 'T', '112D': 'Y', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGCATGTCGAT-1_contig_2 | GGAGTCAGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCGGAGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ2*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCGGAGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCNNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPETFGQGTKLEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPXTFGQGTKLEIK | 1 | 287 | null | null | 292 | 325 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGCTTAATAGTTACCCTCCGGAGACT | QQLNSYPPET | TGTCAACAGCTTAATAGTTACCCTCCGGAGACTTTT | 36.0 | CQQLNSYPPETF | 12.0 | 449.014 | null | 66.059 | 92S287M174S | null | 383S5N34M136S | 4.3899999999999996e-128 | null | 7.003e-15 | 100.0 | null | 100.0 | 93 | 379 | 1 | 287 | null | null | null | null | 384 | 417 | 6 | 39 | 93 | 170 | 171 | 188 | 189 | 239 | 240 | 248 | 249 | 356 | 387.0 | 416.0 | 357.0 | 386.0 | GGAG | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'P', '116 ': 'E', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGGTAAATACG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTCGGATACAGCTATGGTTACTAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTCGGATACAGCTATGGTTACTAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNGGATACAGCTATGGTTACNNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGSDTAMVTNWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXDTAMVTXWGQGTLVTVSS | 1 | 292 | 297.0 | 314.0 | 317 | 352 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGATACAGCTATGGTTAC | DTAMVT | GGATACAGCTATGGTTAC | DTAMVT | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGTCGGATACAGCTATGGTTACTAAC | ARGSDTAMVTN | TGTGCGAGAGGGTCGGATACAGCTATGGTTACTAACTGG | 39.0 | CARGSDTAMVTNW | 13.0 | 456.805 | 35.296 | 69.904 | 92S292M131S1N | 388S2N18M109S | 408S12N36M71S | 1.839e-130 | 5.46e-06 | 4.53e-16 | 100.0 | 100.0 | 100.0 | 93 | 384 | 1 | 292 | 389.0 | 406.0 | 3.0 | 20.0 | 409 | 444 | 13 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 411.0 | 443.0 | 378.0 | 410.0 | GGTC | 4 | TA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'D', '110 ': 'T', '113 ': 'A', '114 ': 'M', '115 ': 'V', '116 ': 'T', '117 ': 'N'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGGTAAATACG-1_contig_2 | TGGGGGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTWVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTWVFGGGTKLTVL | 1 | 286 | null | null | 287 | 322 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTGGGTG | QSADSSGTWV | TGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTC | 36.0 | CQSADSSGTWVF | 12.0 | 447.456 | null | 69.904 | 100S286M247S4N | null | 386S2N36M211S | 1.4819999999999999e-127 | null | 5.591e-16 | 100.0 | null | 100.0 | 101 | 386 | 1 | 286 | null | null | null | null | 387 | 422 | 3 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'T', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGGTAGTGAAT-1_contig_1 | TGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGGTGCGGGGGAGATTCGGTTGTAGTAGTACCAGCTGCGCTTAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD2-2*01 | IGHJ5*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGGTGCGGGGGAGATTCGGTTGTAGTAGTACCAGCTGCGCTTAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNNTTGTAGTAGTACCAGCTGCNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARCGGDSVVVVPAALSWFDPWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXXXXVVVPAAXXWFDPWGQGTLVTVSS | 1 | 296 | 314.0 | 332.0 | 339 | 385 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TTGTAGTAGTACCAGCTGC | VVVPAA | TTGTAGTAGTACCAGCTGC | VVVPAA | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGTGCGGGGGAGATTCGGTTGTAGTAGTACCAGCTGCGCTTAGCTGGTTCGACCCC | ARCGGDSVVVVPAALSWFDP | TGTGCGAGGTGCGGGGGAGATTCGGTTGTAGTAGTACCAGCTGCGCTTAGCTGGTTCGACCCCTGG | 66.0 | CARCGGDSVVVVPAALSWFDPW | 22.0 | 463.037 | 37.218 | 91.054 | 97S296M160S3N | 410S6N19M124S6N | 435S4N47M71S | 2.637e-132 | 1.548e-06 | 2.0939999999999997e-22 | 100.0 | 100.0 | 100.0 | 98 | 393 | 1 | 296 | 411.0 | 429.0 | 7.0 | 25.0 | 436 | 482 | 5 | 51 | 98 | 172 | 173 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 449.0 | 481.0 | 389.0 | 448.0 | GTGCGGGGGAGATTCGG | 17 | GCTTAG | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'C', '108 ': 'G', '109 ': 'G', '110 ': 'D', '111 ': 'S', '111A': 'V', '111B': 'V', '111C': 'V', '112D': 'V', '112C': 'P', '112B': 'A', '112A': 'A', '112 ': 'L', '113 ': 'S', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGGTAGTGAAT-1_contig_2 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ1*01 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLYVFGTGTKVTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLYVFGTGTKVTVL | 1 | 290 | null | null | 291 | 328 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGTCCTATGACAGCAGCCTTTATGTC | QSYDSSLYV | TGCCAGTCCTATGACAGCAGCCTTTATGTCTTC | 33.0 | CQSYDSSLYVF | 11.0 | 453.689 | null | 73.749 | 108S290M249S9N | null | 398S38M211S | 2.016e-129 | null | 3.977e-17 | 100.0 | null | 100.0 | 109 | 398 | 1 | 290 | null | null | null | null | 399 | 436 | 1 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 406.0 | 435.0 | 379.0 | 405.0 | null | 0 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'L', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGGTCAACTGT-1_contig_2 | GGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTGAAAGGAGAGTATTGTAGTAGTACCAGCTGCTATACCCCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD2-2*02 | IGHJ6*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTGAAAGGAGAGTATTGTAGTAGTACCAGCTGCTATACCCCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNNNNNNNNNNNTATTGTAGTAGTACCAGCTGCTATACCNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARLKGEYCSSTSCYTPYYYYGMDVWGQGTTVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXYCSSTSCYTXYYYYGMDVWGQGTTVTVSS | 1 | 298 | 310.0 | 336.0 | 339 | 396 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TATTGTAGTAGTACCAGCTGCTATACC | YCSSTSCYT | TATTGTAGTAGTACCAGCTGCTATACC | YCSSTSCYT | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGACTGAAAGGAGAGTATTGTAGTAGTACCAGCTGCTATACCCCCTACTACTACTACGGTATGGACGTC | ARLKGEYCSSTSCYTPYYYYGMDV | TGTGCGAGACTGAAAGGAGAGTATTGTAGTAGTACCAGCTGCTATACCCCCTACTACTACTACGGTATGGACGTCTGG | 78.0 | CARLKGEYCSSTSCYTPYYYYGMDVW | 26.0 | 466.153 | 52.6 | 112.203 | 98S298M170S1N | 407S4N27M132S | 436S4N58M72S | 3.117e-133 | 3.714e-11 | 9.218999999999999e-29 | 100.0 | 100.0 | 100.0 | 99 | 396 | 1 | 298 | 408.0 | 434.0 | 5.0 | 31.0 | 437 | 494 | 5 | 62 | 99 | 173 | 174 | 203 | 204 | 254 | 255 | 275 | 276 | 389 | 462.0 | 494.0 | 390.0 | 461.0 | TGAAAGGAGAG | 11 | CC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'L', '108 ': 'K', '109 ': 'G', '110 ': 'E', '111 ': 'Y', '111A': 'C', '111B': 'S', '111C': 'S', '111D': 'T', '111E': 'S', '112F': 'C', '112E': 'Y', '112D': 'T', '112C': 'P', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGGTCAACTGT-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCACCGGGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCACCGGGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCNNNNNNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWHRGITFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWXXXITFGQGTRLEIK | 1 | 283 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACTGGCACCGGGGGATCACC | QQRSNWHRGIT | TGTCAGCAGCGTAGCAACTGGCACCGGGGGATCACCTTC | 39.0 | CQQRSNWHRGITF | 13.0 | 442.782 | null | 73.749 | 96S283M181S4N | null | 386S38M136S | 3.345e-126 | null | 3.433e-17 | 100.0 | null | 100.0 | 97 | 379 | 1 | 283 | null | null | null | null | 387 | 424 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | ACCGGGG | 7 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'H', '114 ': 'R', '115 ': 'G', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAAGTAGGTCGAAAGC-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGCGGGTGGGCAGCAGCTGGAACCGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGCGGGTGGGCAGCAGCTGGAACCGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGNNNNNNNGCAGCAGCTGGNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCASGWAAAGTDFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAXXXAAAGXXFDYWGQGTLVTVSS | 1 | 293 | 301.0 | 311.0 | 317 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | GCAGCAGCTGG | AAAG | GCAGCAGCTGG | AAAG | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCGGGTGGGCAGCAGCTGGAACCGACTTTGACTAC | ASGWAAAGTDFDY | TGTGCGAGCGGGTGGGCAGCAGCTGGAACCGACTTTGACTACTGG | 45.0 | CASGWAAAGTDFDYW | 15.0 | 458.363 | 21.837 | 87.208 | 136S293M139S3N | 436S7N11M121S3N | 452S3N45M71S | 6.926e-131 | 0.06793 | 3.0940000000000002e-21 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 437.0 | 447.0 | 8.0 | 18.0 | 453 | 497 | 4 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | CGGGTGG | 7 | AACCG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'G', '108 ': 'W', '109 ': 'A', '110 ': 'A', '111 ': 'A', '112 ': 'G', '113 ': 'T', '114 ': 'D', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAAGTAGGTCGAAAGC-1_contig_2 | AGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCTTTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCTTTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCNNNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLLSITFGQGTRLEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLXXITFGQGTRLEIK | 1 | 283 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGTATGATAATCTCCTTTCGATCACC | QQYDNLLSIT | TGTCAACAGTATGATAATCTCCTTTCGATCACCTTC | 36.0 | CQQYDNLLSITF | 12.0 | 442.782 | null | 73.749 | 93S283M178S4N | null | 380S38M136S | 3.307e-126 | null | 3.396e-17 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 381 | 418 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | TTTC | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '113 ': 'L', '114 ': 'L', '115 ': 'S', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
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