BioLORD-2023: Semantic Textual Representations Fusing LLM and Clinical Knowledge Graph Insights
Paper
•
2311.16075
•
Published
•
6
This is a sentence-transformers from, simply the FremyCompany/BioLORD-2023-M-Dutch-InContext-v1 model but with bf16 instead of float32. It maps sentences & paragraphs to a 768-dimensional dense vector space and can be used for semantic textual similarity, semantic search, paraphrase mining, text classification, clustering, and more.
SentenceTransformer(
(0): Transformer({'max_seq_length': 25, 'do_lower_case': False, 'architecture': 'XLMRobertaModel'})
(1): Pooling({'word_embedding_dimension': 768, 'pooling_mode_cls_token': True, 'pooling_mode_mean_tokens': False, 'pooling_mode_max_tokens': False, 'pooling_mode_mean_sqrt_len_tokens': False, 'pooling_mode_weightedmean_tokens': False, 'pooling_mode_lasttoken': False, 'include_prompt': True})
)
First install the Sentence Transformers library:
pip install -U sentence-transformers
Then you can load this model and run inference.
from sentence_transformers import SentenceTransformer
# Download from the 🤗 Hub
model = SentenceTransformer("sentence_transformers_model_id")
# Run inference
sentences = [
'The weather is lovely today.',
"It's so sunny outside!",
'He drove to the stadium.',
]
embeddings = model.encode(sentences)
print(embeddings.shape)
# [3, 768]
# Get the similarity scores for the embeddings
similarities = model.similarity(embeddings, embeddings)
print(similarities)
# tensor([[1.0000, 0.6914, 0.4062],
# [0.6914, 1.0000, 0.3145],
# [0.4062, 0.3145, 1.0000]], dtype=torch.bfloat16)
This model accompanies the BioLORD-2023: Learning Ontological Representations from Definitions paper. When you use this model, please cite the original paper as follows:
@article{remy-etal-2023-biolord,
author = {Remy, François and Demuynck, Kris and Demeester, Thomas},
title = "{BioLORD-2023: semantic textual representations fusing large language models and clinical knowledge graph insights}",
journal = {Journal of the American Medical Informatics Association},
pages = {ocae029},
year = {2024},
month = {02},
issn = {1527-974X},
doi = {10.1093/jamia/ocae029},
url = {https://doi.org/10.1093/jamia/ocae029},
eprint = {https://academic.oup.com/jamia/advance-article-pdf/doi/10.1093/jamia/ocae029/56772025/ocae029.pdf},
}