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async def mock_async_call(): """ mocks a generic async function """ return True
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def dec_indent(indent, count=1): """ decrease indent, e.g. if indent = " ", and count = 1, return " ", if indent = " ", and count = 2, return "", """ if indent.endswith('\t'): indent = indent[:len(indent) - 1 * count] elif indent.endswith(' '): indent = in...
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import yaml from textwrap import dedent def create_cron_resource(name="cron", minute=5, image="cron-image"): """Create a CronTab resource from parameters. Args: name (str): name of the resource minute (int): time set for the minutes in the CRON specifications. image (str): image used ...
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def freeze_one_half(basis): """ Split the structure into two parts along the z-axis and then freeze the position of the atoms of the upper part (z>0.5) by setting selective dynamics to False. Args: basis (pyiron_atomistics.structure.atoms.Atoms): Atomistic structure object Returns: ...
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def format_args(args): """Formats the args with escaped " """ comma = "," if args else "" return comma + ",".join(['\\\"' + a + '\\\"' for a in args])
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def rescale(ndarray, min, max): """Rescale values of ndarray linearly so min of ndarray is min, max is max Parameters ---------- ndarray: numpy nd array min: int max: int Returns ------- numpy ndarray """ old_max = ndarray.max() old_min = ndarray.min() old_range =...
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def parse_so_terms(so_file): """Retrieve all available Sequence Ontology terms from the file. """ so_terms = [] with open(so_file) as in_handle: for line in in_handle: if line.find('name:') == 0: name = line[5:].strip() so_terms.append(name) return...
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def avgTeq(L, a, e=0., albedo=0., emissivity=1., beta=1.): """compute the time-averaged equilibrium temperature as in Mendez+2017. This uses eqn 16 in Méndez A, Rivera-Valentín EG (2017) Astrophys J 837:L1. https://doi.org/10.3847/2041-8213/aa5f13" Parameters ---------- L : float stell...
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def is_member(user, groups): """ Test if a user belongs to any of the groups provided. This function is meant to be used by the user_passes_test decorator to control access to views. Parameters ---------- user : django.contrib.auth.models.User The user which we are trying to identify t...
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def _UpdateFertileSlotsShape(unused_op): """Shape function for UpdateFertileSlots Op.""" return [[None, 2], [None], [None]]
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def str2bytes(data): """ Converts string to bytes. >>> str2bytes("Pwning") b'Pwning' """ return bytes(data, encoding="utf-8")
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import math def normalize(val, min_val, max_val): """ Normalize the popularity value with log transformation. """ new_val = val - min_val + 1 return math.log(new_val)
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def black_is_not_installed(*args, **kwargs): """Check black is not installed.""" return not args[0] == "black"
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def get_trend(row, window_size, center=True): """ Returns trend component of a time series :param row: pandas series containing the time series to extract seasonality from :param window_size: length of moving window :param center: :return: """ trend = row.rolling(window_size, center=cent...
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def _get_prefixes(response): """ return lists of strings that are prefixes from a client.list_objects() response """ prefixes = [] if 'CommonPrefixes' in response: prefix_list = response['CommonPrefixes'] prefixes = [prefix['Prefix'] for prefix in prefix_list] return prefixes
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def interface_to_ip(interface): """ Gets the IPv4 address from a `net_if_addrs` interface record. The record is passed as a `snic` `namedtuple`. This function locates the IPv4 one and returns it. """ for record in interface: if record.family == 2: # AF_INET return record.add...
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def filter_dict_keys(org_dict, keep_keys): """Helper function to keep only certain keys from config. Pass in a dictionary and list of keys you wish to keep Any keys not in the list will be removed in the returned dictionary""" newDict = dict() # Iterate over all the items in dictionary and filter it...
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import gzip import re def readHeader(fname): """Read QA4ECV NO2 ASCII data header. PARAMETERS ---------- fname : str Path to the filename RETURNS ------- header : a list of useful variables: year, month, nlat, nlon, lat_start, lat_end, lon_start, lon_end """ f=gzip.open(...
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from typing import Set import click def get_states_as_set(state_list: str) -> Set: """Helper method to parse the state string. Args: state_list: comma separated string with codes and states Returns: Set with valid state names in upper case """ codes_to_states = { "BF": "B...
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def transform_globs_into_regexes(globs): """Turns glob patterns into regular expressions.""" return [glob.replace("*", ".*").replace("?", ".") for glob in globs]
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def adjust_convention(img, convention): """ Inverts (could) the image according to the given convention Args: img (np.ndarray): Image numpy array convention (int): -1 or 1 depending on macros.IMAGE_CONVENTION Returns: np.ndarray: Inverted or non inverted (vertically) image. ...
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import textwrap async def snippet_to_embed(file_contents, file_path, start_line, end_line): """Given file contents, file path, start line and end line creates a code block""" split_file_contents = file_contents.splitlines() if start_line is None: start_line, end_line = 1, len(split_file_contents...
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def stringify_keys(d): # taken from https://stackoverflow.com/a/51051641 """Convert a dict's keys to strings if they are not.""" keys = list(d.keys()) for key in keys: # check inner dict if isinstance(d[key], dict): value = stringify_keys(d[key]) else: va...
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def make_average(fn, num_samples=100): """Return a function that returns the average_value of FN when called. To implement this function, you will have to use *args syntax, a new Python feature introduced in this project. See the project description. >>> dice = make_test_dice(3, 1, 5, 6) >>> avg_...
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def format_time(total_seconds, hours_fmt=False, precise=False, hours_pad=True): """ Convert total_seconds float into a string of the form "02:33:44". total_seconds amounts greater than a day will still use hours notation. Output is either in minutes "00:00" formatting or hours "00:00:00" formatting. ...
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def get_channels_number(*, mode: str) -> int: """ This function return the numbers of channels given a color mode. Parameters ---------- mode: str color mode. Returns ------- out: int number of channels associated with the color mode. """ if mode == "YCbCr": ...
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def _merge_ranges(ranges): """ From a list of ranges (i.e.: list of tuples (start_idx, end_idx) Produce a list of non-overlapping ranges, merging those which overlap. :param ranges: list of tuples (start_idx, end_idx) :return: list of tuples (start_idx, end_idx) """ if ranges == []: return [] r...
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def find_when_entered_basement(text): """Find position in text when santa enters basement first time.""" cur_floor = 0 for position, floor_change in enumerate(text, start=1): cur_floor += 1 if floor_change == '(' else -1 if cur_floor < 0: return position return -1
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from typing import Iterable from typing import Tuple from typing import Dict from typing import List def adjacency_list(edges: Iterable[Tuple[str, str]]) -> Dict[str, List[str]]: """ Convert a sequence of undirected edge pairs into an adjacency "list". """ adj = {} for e1, e2 in edges: if...
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import string import random def randStr(chars = string.ascii_uppercase + string.digits + string.ascii_lowercase, N=42): """Generate a random string of len 42 to spoof a reset token""" return ''.join(random.choice(chars) for _ in range(N))
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def _merge(*parts): """ Utility function to merge various strings together with no breaks """ return ''.join(parts)
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def parse_sensors(configuration): """ Bake the sensors array to a dict where the telldus id is the key for easier parsing later on. """ result = {} for sensor in configuration["my_sensors"]: result[sensor["id"]] = sensor return result
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def get_egress_lossless_buffer_size(host_ans): """ Get egress lossless buffer size of a switch Args: host_ans: Ansible host instance of the device Returns: total switch buffer size in byte (int) """ config_facts = host_ans.config_facts(host=host_ans.hostname, ...
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def format_nums(number, decimals): """ rounds to a number of decimals and if possible makes a integer from float :param number: input number :param decimals: decimals to round to :return: integer or float """ if round(float(number), decimals).is_integer(): return int(f"{number:.0f}...
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def _totuple(a): """ Converts a numpy array into nested tuples, so that each row of the array is a different tuple. E.g. a = [ [0 1 2 3] [4 5 6 7] ] out = ((0, 1, 2, 3), (4, 5, 6, 7)) """ try: return tuple(_totuple(i) for i in a) except TypeError: return a
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from pathlib import Path def some_dir(tmp_path) -> Path: """Folder with some data, representing a given state""" base_dir = tmp_path / "original" base_dir.mkdir() (base_dir / "empty").mkdir() (base_dir / "d1").mkdir() (base_dir / "d1" / "f1").write_text("o" * 100) (base_dir / "d1" / "f2")....
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def DEFAULT_REPORT_SCRUBBER(raw): """Default report scrubber, removes breakdown and properties.""" try: del raw['breakdown'] del raw['properties'] except KeyError: pass return raw
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def list_of(cls): """ Returns a function that checks that each element in a list is of a specific type. """ return lambda l: isinstance(l, list) and all(isinstance(x, cls) for x in l)
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def _task_info(clazz): """ from a provided class instance extract task metadata. This will error if any of the expected fields of the task are missing. :param clazz: class object you need metadata for :return: a metadata dictionary """ params = [] for e in clazz.parameters: param...
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import hashlib def sha1sum(filename): """return the sha1 hash of a file""" with open(filename, mode='rb') as f: d = hashlib.sha1() while True: buf = f.read(8192) if not buf: break d.update(buf) return d.hexdigest()
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def get_tokens_from_node(node, result=None): """Return the list of Tokens in the tree starting at node.""" if result is None: result = [] for dtr in node.dtrs: if dtr.isToken(): result.append(dtr) get_tokens_from_node(dtr, result) return result
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import re def parse_string_to_int_tuples(tuples): """ parse a string to tuples, while the string is: (x, x, x, x), (x, x)... """ tuple_list = re.findall('[(](.*?)[)]', tuples) ret = [] for i in tuple_list: int_shape = [] shape = i.strip().split(',') for j in shape: if j: int_...
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import requests from bs4 import BeautifulSoup def get_url_from_character_page(url_IDMB,THUMBNAIL_CLASS="titlecharacters-image-grid__thumbnail-link"): """ Gets url of image viewer of a serie pictures on IMDB (e.g. https://www.imdb.com/title/tt0108778/mediaviewer/rm3406852864) Given the url of a character o...
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def get_orders_list(orders_dict): """Returns orders list from orders dict""" return orders_dict.get('orders')
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def _generate_anchor_configs(min_level, max_level, num_scales, aspect_ratios): """Generates mapping from output level to a list of anchor configurations. A configuration is a tuple of (num_anchors, scale, aspect_ratio). Args: min_level: integer number of minimum level of the output feature pyramid. ...
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import copy def sequences_add_end_id_after_pad(sequences, end_id=888, pad_id=0): """Add special end token(id) in the end of each sequence. Parameters ----------- sequences : list of list of int All sequences where each row is a sequence. end_id : int The end ID. pad_id : int ...
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import sqlite3 import typing def get_robot_types(cursor: sqlite3.Cursor) -> typing.List[dict]: """Gets all robot types from the db :param cursor: [description] :type cursor: sqlite3.Cursor :return: [description] :rtype: typing.List[dict] """ return cursor.execute( "SELECT id, nam...
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from typing import Sequence from typing import Dict def get_tagged_secrets(secrets_manager, secrets_tags: Sequence[str]) -> Dict[str, str]: """ Return a dictionary of AWS Secrets Manager names to arns for any secret tagged with `secrets_tag`. """ secrets = {} paginator = secrets_manager.get_p...
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def usechangesetcentricalgo(repo): """Checks if we should use changeset-centric copy algorithms""" if repo.filecopiesmode == b'changeset-sidedata': return True readfrom = repo.ui.config(b'experimental', b'copies.read-from') changesetsource = (b'changeset-only', b'compatibility') return readf...
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def can_zip_response(headers): """ Check if request supports zipped response :param headers: request headers :return: """ if 'ACCEPT-ENCODING' in headers.keys(): if 'gzip' in headers.get('ACCEPT-ENCODING'): return True return False
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from typing import Optional from typing import Dict from typing import List def get_mock_aws_alb_event( method, path, query_parameters: Optional[Dict[str, List[str]]], headers: Optional[Dict[str, List[str]]], body, body_base64_encoded, multi_value_headers: bool, ): """Return a mock AWS...
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def get_artist_names(artist_database, artist_id): """ Return the list of names corresponding to an artist """ if str(artist_id) not in artist_database: return [] alt_names = [artist_database[str(artist_id)]["name"]] if artist_database[str(artist_id)]["alt_names"]: for alt_name...
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def containsAll(str, set): """ Checks if a given string contains all characters in a given set. :param str: input string :type: string :param set: set if characters :type: string :rtype: boolean """ for c in set: if c not in str: return False return True
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def format_artist_rating(__, data): """Returns a formatted HTML line describing the artist and its rating.""" return ( "<li><a href='{artist_tag}/index.html'>{artist}</a>" " - {rating:.1f}</li>\n" ).format(**data)
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def _human_list(listy): """ Combines a list of strings into a string representing the list in plain English, i.e. >>> _human_list(["a"]) "a" >>> _human_list(["a", "b"]) "a and b" >>> _human_list(["a", "b", "c"]) "a, b and c" """ if len(listy) == 1: return listy[0] ...
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import hashlib def _hash_file(fpath, algorithm="sha256", chunk_size=65535): """Calculates a file sha256 or md5 hash. # Example ```python >>> from keras.data_utils import _hash_file >>> _hash_file('/path/to/file.zip') 'e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b8...
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def avoid_keyerror(dictionary, key): """ Returns the value associated with key in dictionary. If key does not exist in the dictionary, print out 'Avoid Exception' and map it to the string 'no value'. >>> d = {1: 'one', 3: 'three', 5: 'five'} >>> avoid_keyerror(d, 3) 'three' >>> avoid_keyer...
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def string_boolean(value): """Determines the boolean value for a specified string""" if value.lower() in ('false', 'f', '0', ''): return False else: return True
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import torch def cosine_similarity(x, y=None, eps=1e-8): """Calculate cosine similarity between two matrices; Args: x: N*p tensor y: M*p tensor or None; if None, set y = x This function do not broadcast Returns: N*M tensor """ w1 = torch.norm(x, p=2, dim=1, keepdim=True) if y is None...
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def all_same(L): """Check if all elements in list are equal. Parameters ---------- L : array-like, shape (n,) List of objects of any type. Returns ------- y : bool True if all elements are equal. """ y = len(L) == 0 or all(x == L[0] for x in L) return y
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def _IsDuplicateInterestedUser(url_entity, bots_user_key): """Checks if bots_user_key exist in interested_users. Args: url_entity: BotsUrl Entity to check for. bots_user_key: bots_user entity key (db.Key). Returns: True if bots_user_key exist in interested_users, else False. """ return str(bots_...
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def defined_or_defaut_dir(default, directory): """ if given a directory it will return that directory, otherwise it returns the default """ if directory: return directory else: return default
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def display_timedelta(minutes): """Converts timedelta in minutes to human friendly format. Parameters ---------- minutes: int Returns ------- string The timedelta in 'x days y hours z minutes' format. Raises ------ ValueError If the timedelta is negative. "...
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def obs_model_parameter_values(values): """ Return a list containing all of the values for a single parameter. :param values: The values for the parameter. :type values: Union[List[Any], Any] """ if isinstance(values, list): return values else: return [values]
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import ast def subscript_type_to_string(subscript: ast.Subscript) -> str: """ Returns a string representation of a subscript. For example, if the subscript is Optional[int] it returns "Optional[int]". """ return ast.unparse(subscript)
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import random def makelist(random_int): """Creates a list of random float values of total list length random_int (specified as function param)""" num_list = [] for count in range(random_int): num_list.append(random.random()) return num_list
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def get_table_headers(table): """Given a table soup, returns all the headers""" headers = [] for th in table.find("tr").find_all("th"): headers.append(th.text.strip()) return headers
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import logging from datetime import datetime from pathlib import Path import requests def download_file(url, file_location=None, overwrite=False): """ Purpose: Download file from specified URL and store in a specfied location. If no location is provided, the file is downloaded in the current ...
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import re def md(text): """Basic filter for escaping text in Markdown.""" return re.sub(r'([_*])', r'\\\1', text)
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def get_confirmation_block_from_results(*, block_identifier, results): """ Return the confirmation block from results list """ return next((i for i in results if i['message']['block_identifier'] == block_identifier), None)
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def add(initial: int=0, number: int=0) -> int: """Return sum of *intial* and *number*. :param initial: Initial value. :type initial: int :param number: Value to add to initial. :type number: int :return: Sum of initial and number. :rtype: int """ return initial + number
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from urllib.parse import urlencode from typing import OrderedDict def make_pr_link(url, project, slug, from_branch, to_branch): """Generates a URL that can be used to create a PR""" if "github.com" in url: result = "{url}/{organization}/{repo_name}/compare/{to_branch}...{from_branch}".format( ...
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from typing import List from typing import Tuple def generate_options_for_point(x: int, y: int, z: int) -> List[Tuple[int, int, int]]: """ generate 24 different orientations for point presented of (x, y, z) """ return [(x, y, z), (z, y, -x), (-x, y, -z), (-z, y, x), (-y, x, z), (z, x, y), ...
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def filter_bin(length, index_pairs): """ 用于某些二进制标志位的场景 index_pairs: {index: value,} 返回 length 长度内第 index 位值为 value 的所有可能的 int 的 list, index 从 1 开始, e.g. >>> filter_bin(3, {1: 1}) [1, 3, 5, 7] >>> filter_bin(3, {1: 1, 2: 0}) [1, 5] >>> filter_bin(3, {1: 0, 2: 1}) [2, 6] """ ...
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def switch_month(month: str): """ Translates an english month to a french one. For example: 'Jan' becomes '(01)Janvier'. month : the month that will be translated """ return { "Jan": "(01)Janvier", "Feb": "(02)Fevrier", "Mar": "(03)Mars", "Apr": "(04)Avril", ...
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import json def extract_json(serie, k): """Extract a value by a key.""" return serie.map(lambda row: json.loads(row)[k])
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def escape_quotes(s: str) -> str: """Replaces double quotes in the input string with either ' or \\". Description: Given a string, returns that string with double quotes escaped in one of two ways. If the string contains single quotes, then \\" will be used to escape the double quotes....
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def process_icon_emoji(inIconEmoji: str) -> str: """Process an 'icon_emoji' string. Args: inIconEmoji: Single icon emoji string. Returns: Properly formatted 'icon_emoji' string """ tmpStr = inIconEmoji.strip(": ") return f":{tmpStr}:" if tmpStr else ""
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def GetLabelsFromDict(metadata): """Converts a metadata dictionary to a string of labels. Args: metadata: a dictionary of string key value pairs. Returns: A string of labels in the format that Perfkit uses. """ return ','.join('|%s:%s|' % (k, v) for k, v in metadata.iteritems())
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def generate_md_code_str(code_snippet: str, description: str = 'Snippet') -> str: """The normal ``` syntax doesn't seem to get picked up by mdv. It relies on indentation based code blocks. This one liner accommodates for this by just padding a code block with 4 additional spaces. Hacky? Sure. Effective? Yu...
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def subsample(data, every=5): """Subsample to the desired frequency. Use every `every`th sample.""" return data[::every]
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def get_subclasses(klass): """Gets the list of direct/indirect subclasses of a class""" subclasses = klass.__subclasses__() for derived in list(subclasses): subclasses.extend(get_subclasses(derived)) return subclasses
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def is_vulnerable(source): """A simple boolean function that determines whether a page is SQL Injection vulnerable from its `response`""" errors = { # MySQL "you have an error in your sql syntax;", "warning: mysql", # SQL Server "unclosed quotation mark after the cha...
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def skip_material(mtl: int) -> int: """Computes the next material index with respect to default avatar skin indices. Args: mtl (int): The current material index. Returns: int: The next material index to be used. """ if mtl == 1 or mtl == 6: return mtl + 2 return mtl + 1
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import json import requests def getProcedures(host, service): """ Get all the procedures (stations) using the WA-REST API """ proc_url = f"http://{host}/istsos/wa/istsos/services/{service}/procedures/operations/getlist" # Request and Get the procedures from the response procedures = json.loa...
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def agg_moy_par_pret(dataframe, group_var, prefix): """Aggregates the numeric values in a dataframe. This can be used to create features for each instance of the grouping variable. Parameters -------- dataframe (dataframe): the dataframe to calculate the statistics on g...
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import unicodedata def lowercase_and_remove_accent(text): """ Lowercase and strips accents from a piece of text based on https://github.com/facebookresearch/XLM/blob/master/tools/lowercase_and_remove_accent.py """ text = " ".join(text) text = text.lower() text = unicodedata.normalize("NFD"...
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import random def blood_pressure_depending_on_age(age): """Randomly generate a blood pressure value depending upon the given age value. It is assumed that for a given age value the blood pressure is normally distributed with an average blood pressure of 75 at birth (age 0) and of 90 at age 100,...
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def write_content(path, content): """Write string content to path name.""" print(f"- writing {path}") with open(path, 'w') as file: file.write(content) return path
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import hashlib def sha1_hash(bytes): """ Compute the SHA-1 hash of a byte stream. """ sha = hashlib.sha1() sha.update(bytes) return sha.digest()
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def founder_allocation() -> float: """How much tokens are allocated to founders, etc.""" return 0.2
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import torch def generate_padding_masks(data, pad_value=0): """ Returns a mask based on the data. For values of the padding token=0, the mask will contain 1, indicating the model cannot attend over these positions. :param data: The data of shape (sequence_len, batch_size) :param pad_value: The val...
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from typing import Dict def _get_local_logging_config() -> Dict: """Create local logging config for running the dummy projects.""" return { "version": 1, "formatters": { "simple": {"format": "%(asctime)s - %(name)s - %(levelname)s - %(message)s"} }, "root": {"level"...
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import warnings def get_mol_3d_coordinates(mol): """Get 3D coordinates of the molecule. This function requires that molecular conformation has been initialized. Parameters ---------- mol : rdkit.Chem.rdchem.Mol RDKit molecule instance. Returns ------- numpy.ndarray of shape ...
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def population_render_transparency(x, invert_colours=False, b=None): """Render image from patches with transparancy. Renders patches with transparency using black as the transparent colour. Args: x: tensor of transformed RGB image patches of shape [S, B, 5, H, W]. invert_colours: Invert all RGB values. ...
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def youngs(vp=None, vs=None, rho=None, mu=None, lam=None, bulk=None, pr=None, pmod=None): """ Computes Young's modulus given either Vp, Vs, and rho, or any two elastic moduli (e.g. lambda and mu, or bulk and P moduli). SI units only. Args: vp, vs, and rho or any 2 from la...
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def initial_workload_is_ready(ops_test, app_names) -> bool: """Checks that the initial workload (ie. x/0) is ready. Args: ops_test: pytest-operator plugin app_names: array of application names to check for Returns: whether the workloads are active or not """ return all( ...
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def duplication_consistency(set_one, set_two): """ Calculates the duplication consistency score for two sets of species :param set_one: set/list of species :param set_two: set/list of species :return: float with duplication consistency score """ union_size = len(set(set_one).union(set(set_t...
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def _auto_correlations(n_states): """Returns list of autocorrelations Args: n_states: number of local states Returns: list of tuples for autocorrelations >>> l = _auto_correlations(np.arange(3)) >>> assert l == [(0, 0), (1, 1), (2, 2)] """ local_states = n_states retur...
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import re def process_clinical_significance(clin_sig): """ Processes ClinVar clinical significance string into a format suitable for OT JSON schema. Namely, splits multiple clinical significance levels into an array and normalises names (to lowercase, using only spaces for delimiters). Multiple level...
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