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def normalize_search_terms(search_terms: str)->str: """ Normalize the search terms so that searching for "A b c" is the same as searching for "a b C", "B C A", etc. Args: search_terms (str): Space-delimited list of search terms. Returns: (str): Space-delimited search terms, lowerca...
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from typing import Set def candidates_to_bits(candidates: Set[int]) -> int: """ Convert a candidates set into its bits representation The bits are in big endian order >>> bin(candidates_to_bits({1, 2, 3, 6, 7})) '0b1100111' >>> bin(candidates_to_bits({6, 9})) '0b100100000' """ bi...
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def get_compute_op_list(job_content): """ Get compute op info list from job content info :param job_content: tbe compilation content info :return: compute op info list """ op_list = job_content["op_list"] op_compute_list = [] for op in op_list: if op["type"] != "Data": ...
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def remove_namespace(tag, name, ns_dict): """Used to remove namespaces from tags to create keys in dictionary for quick key lookup. Attr: tag(str): Full tag value. Should include namespace by default. name(str): The namespace key. Usually the ticker of the company. ns_di...
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from typing import List def flip_v(matrix: List[List]) -> List[List]: """Flip a matrix (list of list) vertically """ return matrix[::-1]
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from typing import Union def int_conversion(string: str) -> Union[int, str]: """ Check and convert string that can be represented as an integer :param string: Input string :return: Result of conversion """ try: value = int(string) except ValueError: value = string ret...
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def str_to_bool(string, truelist=None): """Returns a boolean according to a string. True if the string belongs to 'truelist', false otherwise. By default, truelist has "True" only. """ if truelist is None: truelist = ["True"] return string in truelist
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def level_to_criticality(level: int) -> str: """Translate level integer to Criticality string.""" if level >= 4: return "Very Malicious" elif level >= 3: return "Malicious" elif level >= 2: return "Suspicious" elif level >= 1: return "Informational" return "Unknow...
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def get_title_to_id_dict(titles): """Creates a dict mapping each title with an id. :param titles: list of titles :type titles: list :return: dict mapping a title to an id. :rtype: dict """ title_to_id = {title: i for i, title in enumerate(titles)} return title_to_id
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def timestep(dtime, time, end_time): """ calculates the timestep for a given time Returns the timestep if the calculation isnt overstepping the endtime if it would overstep it returns the resttime to calculte to the endtime. :param dtime: timestep :param time: current time in simulation :p...
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def compose_tbl_filename( key_names, key_indices=None, prefix='tbl', suffix='txt', var_separator='.', idx_separator='-'): """compose a file name based on key names Parameters ---------- key_names : list of str A list of key names key_indices : list of str A l...
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import random def _random_value(x = None, min=0, max=10): """ (not very eye pleasing ;) returns a random int between min and max """ return random.randint(min,max)
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import re def _is_bed_row(bed_row): """Checks the format of a row of a bedfile. The logic is to check the first three fields that should be chromosome start end.""" if len(bed_row) < 3: return False return ( (re.match(r"^chr.+$", bed_row[0]) is not None) and (re.match(r"^[0...
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import collections def group_train_data(training_data): """ Group training pairs by first phrase :param training_data: list of (seq1, seq2) pairs :return: list of (seq1, [seq*]) pairs """ groups = collections.defaultdict(list) for p1, p2 in training_data: l = groups[tuple(p1)] ...
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def gcd(a, b): """Calculate Greatest Common Divisor (GCD).""" return b if a == 0 else gcd(b % a, a)
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def _samples_calls(variant_collection, dataset_id, samples): """Count all allele calls for a dataset in variants collection Accepts: variant_collection(pymongo.database.Database.Collection) dataset_id(str): id of dataset to be updated samples(list): list of dataset samples Returns: ...
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import zlib def decode_gzip(content): """Return gzip-decoded string. Arguments: - `content`: bytestring to gzip-decode. """ return zlib.decompress(content, 16 + zlib.MAX_WBITS)
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from functools import reduce import operator def prod(iterable): """Take product of iterable like.""" return reduce(operator.mul, iterable, 1)
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def external(cls): """ Decorator. This class or package is meant to be used *only* by code outside this project. """ return cls
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def get_tag(body): """Get the annotation tag from the body.""" if not isinstance(body, list): body = [body] try: return [b['value'] for b in body if b['purpose'] == 'tagging'][0] except IndexError: return None
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def check_is_faang(item): """ Function checks that record belongs to FAANG project :param item: item to check :return: True if item has FAANG project label and False otherwise """ if 'characteristics' in item and 'project' in item['characteristics']: for project in item['characteristics'...
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def preprocess_prediction_data(data, tokenizer): """ It process the prediction data as the format used as training. Args: data (obj:`List[str]`): The prediction data whose each element is a tokenized text. tokenizer(obj: paddlenlp.data.JiebaTokenizer): It use jieba to cut the chinese strin...
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def ListFeatures(font): """List features for specified font. Table assumed structured like GPS/GSUB. Args: font: a TTFont. Returns: List of 3-tuples of ('GPOS', tag, name) of the features in the font. """ results = [] for tbl in ["GPOS", "GSUB"]: if tbl in font.keys(): results += [ ...
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def split_string_content(content): """ Split the string content and returns as a list. """ file_contents = content.split("\n") if file_contents[-1] == '': file_contents = file_contents[:-1] return file_contents
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def is_widget(view): """ Returns `True` if @view is a widget. """ return view.settings().get('is_widget')
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def geom_cooling(temp, alpha = 0.95): """ Geometric temperature decreasing procedure allows for temperature variations after every iteration (k). It returns a value of temperature such that T(k+1)=alpha*(T) Parameters ---------- temp: float Current temperature. ...
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import time def apipoll(endpoint, *args, **kwargs): """Poll an api endpoint until there is a result that is not None poll_wait and max_poll can be specified in kwargs to set the polling interval and max wait time in seconds. """ result = endpoint(*args, **kwargs) if result is not None: ...
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def multiply(a, b): """ >>> multiply(3, 5) 15 >>> multiply(-4, 5) -20 >>> multiply(-4, -2) 8 """ iterator = 0 value = 0 if iterator < a: while iterator < a: value += b iterator += 1 else: while iterator > a: value -= b ...
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import re def human2bytes(s): """ >>> human2bytes('1M') 1048576 >>> human2bytes('1G') 1073741824 """ symbols = ('Byte', 'KiB', 'MiB', 'GiB', 'T', 'P', 'E', 'Z', 'Y') num = re.findall(r"[0-9\.]+", s) assert (len(num) == 1) num = num[0] num = float(num) for i, n in enumer...
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def print14list(pair14, shift, molecule): """Generate pair 14 list line Parameters ---------- pair14 : Angle Object Angle Object shift : int Shift produced by structural dummy atoms molecule : molecule object Molecule object Returns ------- pair14 : str ...
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import struct def readu8(file): """ Reads an unsigned byte from the file.""" data = file.read(1) return struct.unpack("B", data)[0]
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def is_float(istring): """Convert a string to a float. Parameters ---------- istring : str String to convert to a float. Returns ------- float Converted float when successful, ``0`` when when failed. """ try: return float(istring.strip()) except Exceptio...
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from typing import List def prime_factors(n: int) -> List[int]: """Return an ascending list of the (greather-than-one) prime factors of n. >>> prime_factors(1) [] >>> prime_factors(2) [2] >>> prime_factors(4) [2, 2] >>> prime_factors(60) [2, 2, 3, 5] """ factors = [] d = 2 while d * d <=...
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def _proposed_scaling_both(current, desired): """ identify a x and y scaling to make the current size into the desired size Arguments --------- current : tuple float tuple of current size of svg object desired : tuple float tuple of desired size of svg object Returns --...
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def prometheus_worker_job_count(prometheus, testconfig): """ Given a type of a worker job (ReportJob or NotifyJob), returns the value of that metric """ def _prometheus_worker_job_count(job_type): metric_response_codes = prometheus.get_metric( f"apisonator_worker_job_count{{namespace...
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def truncate_descriptions(requested_user_rooms): """ Cut descriptions if too long """ for i in range(0, len(requested_user_rooms)): if len(requested_user_rooms[i]['description']) >= 85: requested_user_rooms[i]['description'] = requested_user_rooms[i]['description'][0:85] + "..." ...
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def calculate_expected_wins(win_rate, num_games): """Calculate current expected wins""" expected_wins = win_rate * float(num_games) result = int(round(expected_wins, 0)) return result
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def get_virtualenv_dir(version): """Get virtualenv directory for given version.""" return "version-{}".format(version)
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def convert_timestamp(timestamp: str) -> int: """ Converts a timestamp (MM:SS) to milliseconds. """ timestamp_list = timestamp.split(":") minutes = timestamp_list[0] seconds = timestamp_list[1] minutes_in_ms = int(minutes) * 60 * 1000 seconds_in_ms = int(seconds) * 1000 total_ms = m...
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def chk_keys(keys, src_list): """Check the keys are included in the src_list :param keys: the keys need to check :param src_list: the source list """ for key in keys: if key not in src_list: return False return True
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def field(fields, **kwargs): """Helper for inserting more fields into a metrics fields dictionary. Args: fields: Dictionary of metrics fields. kwargs: Each argument is a key/value pair to insert into dict. Returns: Copy of original dictionary with kwargs set as fields. """ f = fields.copy() f....
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def get_name(model, index: int): """Get the input name corresponding to the input index""" return model.inputs[index]
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def chunkString(string, length): """This function returns a generator, using a generator comprehension. The generator returns the string sliced, from 0 + a multiple of the length of the chunks, to the length of the chunks + a multiple of the length of the chunks. Args: string (String): ...
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def post_process_headways(avg_headway, number_of_trips_per_hour, trip_per_hr_threshold=.5, reset_headway_if_low_trip_count=180): """Used to adjust headways if there are low trips per hour observed in the GTFS dataset. If the number of trips per hour is below the trip frequency interval...
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def sop_classes(uids): """Simple decorator that adds or extends ``sop_classes`` attribute with provided list of UIDs. """ def augment(service): if not hasattr(service, 'sop_classes'): service.sop_classes = [] service.sop_classes.extend(uids) return service return ...
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import re def parse_show_ip_ecmp(raw_result): """ Parse the 'show ip ecmp' command raw output. :param str raw_result: vtysh raw result string. :rtype: dict :return: The parsed result of the show ip ecmp in a \ dictionary of the form: :: { 'global_status': True, ...
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import sympy def DfjDxi(DN,f): """ This method defines a gradient. Returns a matrix D such that D(i,j) = D(fj)/D(xi) This is the standard in fluid dynamics, that is: D(f1)/D(x1) D(f2)/D(x1) D(f3)/D(x1) D(f1)/D(x2) D(f2)/D(x2) D(f3)/D(x2) D(f1)/D(x3) D(f2)/D(x3) D(f3)/D(x3) Ke...
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def manhattan_distance(p1, p2): """ Precondition: p1 and p2 are same length :param p1: point 1 tuple coordinate :param p2: point 2 tuple coordinate :return: manhattan distance between two points p1 and p2 """ distance = 0 for dim in range(len(p1)): distance += abs(p1[dim] - p2[di...
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def tags_with_text(xml, tags=None): """Return a list of tags that contain text retrieved recursively from an XML tree """ if tags is None: tags = [] for element in xml: if element.text is not None: tags.append(element) elif len(element) > 0: tags_with_...
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def generate_text_notebook() -> str: """Generate `notebook.md` content.""" content = ( """\ --- file_format: mystnb kernelspec: name: python3 --- # Text-based Notebook ```{code-cell} print("Hello, World!") ``` """.rstrip() + "\n" ) return content
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def build_vector(image, binary=True): """ 图像转一维特征向量 :param image: pillow Image object with mode 1 or mode L :param binary: 黑白图是否生成为0,1向量 :return: list of int """ vector = [] for pixel in image.getdata(): if binary: vector.append(1 if pixel == 255 else 0) else:...
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def combine_docs(docs): """ Combine documents from a list of documents. Only combines if the element is a string. Parameters ---------- `docs` : `list`. Documents to combine Returns ------- `string` : Combined string of documents """ combined_docs = "" for doc in docs: ...
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from datetime import datetime def restore_timestamp(formatted_timestamp): """Return a timestamp from a formatted string.""" return datetime.strptime(formatted_timestamp, "%Y-%m-%d %H:%M:%S").strftime('%Y%m%d%H%M%S')
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def div(n, d): """Divide, with a useful interpretation of division by zero.""" try: return n/d except ZeroDivisionError: if n: return n*float('inf') return float('nan')
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def wrap(ag, compound='atoms'): """ Shift the contents of a given AtomGroup back into the unit cell. :: +-----------+ +-----------+ | | | | | 3 | 6 | 6 3 | | ! | ! | ! ! | | 1-2-|-5-8 -> |...
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def parse_scripts(scp_path, value_processor=lambda x: x, num_tokens=2): """ Parse kaldi's script(.scp) file If num_tokens >= 2, function will check token number """ scp_dict = dict() line = 0 with open(scp_path, "r") as f: for raw_line in f: scp_tokens = raw_line.strip()....
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import json def read_json(fjson): """ Args: fjson (str) - file name of json to read Returns: dictionary stored in fjson """ with open(fjson) as f: return json.load(f)
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def map_pathogen_id_to_name(pathogen_id): """ """ mapping = { "p00": "Acinetobacter baumannii", "p01": "Baceroides fragilis", "p02": "Burkholderia cepacia", "p03": "Candida albicans", "p04": "Candida giabrata", "p05": "Candida parapsilosis", "p06": "Ca...
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def get_unique_covered_percentage(fuzzer_row_covered_regions, fuzzer_col_covered_regions): """Returns the number of regions covered by the fuzzer of the column but not by the fuzzer of the row.""" unique_region_count = 0 for region in fuzzer_col_covered_regions: ...
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def check_mid_low(device_name): """Check if a device domain contains mid or low""" domain, *_ = device_name.split("/") if "mid" in domain or "low" in domain: return True return False
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def getSonarData(sensor, angle): """ Transmits the sonar angle and returns the sonar intensities Args: sensor (Ping360): Sensor class angle (int): Gradian Angle Returns: list: Intensities from 0 - 255 """ sensor.transmitAngle(angle) data = bytearray(getattr(sensor, '_...
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def _validate_params_epaipm(etl_params): """Validate the etl parameters for EPA IPM. Args: etl_params (iterable): dictionary of inputs Returns: iterable: validated dictionary of inputs """ epaipm_dict = {} # pull out the etl_params from the dictionary passed into this function ...
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import random def generate_emoji(num_emojis: int) -> str: """ Generates a psuedo-random list of emojis with pasta sprinkled in """ emojis = ["🙄", "😙", "😐", "🤤", "😤", "😲", "😬", "😭", "🥵", "🥺", "🤠", "🤫", "😳", "😢"] output: str = "" for _ in range(num_emojis): output += random.choice(...
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def try_attribute(node, attribute_name, default=None): """Tries to get an attribute from the supplied node. Returns the default value if the attribute is unavailable.""" if node.hasAttribute(attribute_name): return node.getAttribute(attribute_name) return default
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import re def parse_size(size): """Parse a size, kinda like 10MB, and return an amount of bytes.""" size_re = re.compile(r'^(\d+)([GMK]?B)$') match = size_re.match(size.upper()) if not match: raise ValueError("Invalid size %r" % size) amount, unit = match.groups() amount = int(amount) ...
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def convert_email(value: str) -> str: """Convert email domain from student to employee or vice versa""" user, domain = value.split('@') if domain.startswith('st.'): return f"{user}@{domain[3:]}" else: return f"{user}@st.{domain}"
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def intersection(r1, r2): """Calculates the intersection rectangle of two regions. Args: r1, r2 (dict): A dictionary containing {x1, y1, x2, y2} arguments. Returns: dict or None: A dictionary in the same fashion of just the intersection or None if the regions do not int...
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def get_label_name_from_dict(labels_dict_list): """ Parses the labels dict and returns just the names of the labels. Args: labels_dict_list (list): list of dictionaries Returns: str: name of each label separated by commas. """ label_names = [a_dict["name"] for a_dict in labels...
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def _FormatToken(token): """Converts a Pythonic token name into a Java-friendly constant name.""" assert str(token).startswith('Token.'), 'Expected token, found ' + token return str(token)[len('Token.'):].replace('.', '_').upper()
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def is_fun_upd(t): """Whether t is fun_upd applied to three parameters, that is, whether t is of the form f (a := b). """ return t.is_comb('fun_upd', 3)
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def select_field(features, field): """Select a field from the features Arguments: features {InputFeatures} -- List of features : Instances of InputFeatures with attribute choice_features being a list of dicts. field {str} -- Field to consider. Returns: [list] -- List ...
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import re def purify_app_references(txt: str) -> str: """ Remove references to `/app`. """ txt = re.sub("/app/", "", txt, flags=re.MULTILINE) return txt
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def paths_from_issues(issues): """Extract paths from list of BindConfigIssuesModel.""" return [issue.path for issue in issues]
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def get_hosts_descriptions(hosts_scans): """ Get the hosts descriptions Args: hosts_scans (list[dict]): hosts scans information. Returns: List[dict]: images descriptions. """ return [ { "Hostname": scan.get("hostname"), "OS Distribution": scan.ge...
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def draw_rectangle(image=None, coordinates=None, size=None, color=None): """ Generate a rectangle on a given image canvas at the given coordinates :param image: Pillow/PIL Image Canvas :param coordinates: coordinate pair that will be the center of the rectangle :param size: tuple with the x...
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def _get_real_chan_name(chan): """ Get the real channel name Channels with a light group will have the light group appended to the name """ ch_name = chan.channel_name lgt_grp = chan.light_group.strip() if lgt_grp != '' and lgt_grp not in ch_name: ch_name = '%s_%s' % (ch_name, lgt_gr...
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def getOutputsNames(net): """Get the output names from the output layer Arguments: net {network} -- Yolo network Returns: list -- List of names """ layersNames = net.getLayerNames() return [layersNames[i[0] - 1] for i in net.getUnconnectedOutLayers()]
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from typing import List def ds_make(n: int) -> List[int]: """ Make n subsets containing the numbers 0 to n - 1. """ # The value of element i is the parent of that set # If parent is itself then it's the root return [i for i in range(n)]
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import torch def batched_concat_per_row(A, B): """Concat every row in A with every row in B where the first dimension of A and B is the batch dimension""" b, m1, n1 = A.shape _, m2, n2 = B.shape res = torch.zeros(b, m1, m2, n1 + n2) res[:, :, :, :n1] = A[:, :, None, :] res[:, :, :, n1:] ...
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def process_dataset(dataset, labeler): """Labels all items of the dataset with the specified labeler.""" return {item: labeler.label_object(item, true_description) for item, true_description in dataset.items()}
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def user_info( first_name, last_name, **profile): """Function that builds user information.""" profile['firstname'] = first_name profile['lastname'] = last_name return profile
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def harmonic_mean(frequencies1, frequencies2): """Finds the harmonic mean of the absolute differences between two frequency profiles, expressed as dictionaries. Assumes every key in frequencies1 is also in frequencies2 >>> harmonic_mean({'a':2, 'b':2, 'c':2}, {'a':1, 'b':1, 'c':1}) 1.0 >>> har...
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def dnfcode_key(code): """Return a rank/dnf code sorting key.""" # rank [rel] '' dsq hd|otl dnf dns dnfordmap = { u'rel':8000, u'':8500, u'hd':8800,u'otl':8800, u'dnf':9000, u'dns':9500, u'dsq':10000,} ...
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import itertools def countCombosSumEqual(sm: int, nums: list) -> int: """ Count all possible combos of elements in nums[] such that sum(combo) == sm Args: sm (int): the sum to match. nums (list): list of positive integers. Returns: int: resulting count. If nums[0] == sm,...
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import re def titleize(name): """ Titleize a course name or instructor, taking into account exceptions such as II. """ name = re.sub(r'I(x|v|i+)', lambda m: 'I' + m.group(1).upper(), name.strip().title()) name = re.sub(r'(\d)(St|Nd|Rd|Th)', lambda m: m.group(1) + m.group(2).lower(), name) name = re.su...
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def get_prediction_results(data, labels, predict_prob, vocab_dict, label_dict): """ Get the prediction and the true labels with the words in conll format @params : data - unpadded test data @params : labels - unpadded test labels @params : predict_prob - the predicted probabilities @params : voc...
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def get_index_of_user_by_id(id_value, data): """Get index of user in list by id""" for count, item in enumerate(data): if item['id'] == id_value: return count return None
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def starts_new_warning(line) -> bool: """Return true if the line starts a new warning.""" return "warning:" in line
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def find_path(start, end, parents): """ Constructs a path between two vertices, given the parents of all vertices. Parameters ---------- start : int The first verex in the path end : int The last vertex in the path parents : list[int] The parent of a vertex in its pa...
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def get_class_image_ids(self, class_name=None, class_id=None): """ Retrieves image_ids associated with class_name or class_id """ return self.get_class_info(class_id=class_id, class_name=class_name)['image_ids']
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from typing import Union def _get_vars(symbol: Union[str, int]) -> str: """Get the javascript variable declarations associated with a given symbol. These are adapted from plotly.js -> src/components/drawing/symbol_defs.js Args: symbol: The symbol whose variables should be retrieved. Returns...
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import re def make_consts_consecutive(s): """ The given phenotype will have zero or more occurrences of each const c[0], c[1], etc. But eg it might have c[7], but no c[0]. We need to remap, eg: 7 -> 0 9 -> 1 so that we just have c[0], c[1], etc. :param s: A given phenotype str...
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def normalized_value(xs): """ normalizes a list of numbers :param xs: a list of numbers :return: a normalized list """ minval = min(xs) maxval = max(xs) minmax = (maxval-minval) * 1.0 return [(x - minval) / minmax for x in xs]
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import yaml def _yaml_reader(yaml_file): """Import the YAML File for the YOLOv5 data as dict.""" with open(yaml_file) as file: data = yaml.safe_load(file) return data
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def valid_for_gettext(value): """Gettext acts weird when empty string is passes, and passing none would be even weirder""" return value not in (None, "")
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def convert_indices(direction, x, y): """ Converts indices between Python and Fortran indexing, assuming that Python indexing begins at 0 and Fortran (for x and y) begins at 1. In Tracmass, the vertical indexing does begin at zero so this script does nothing to vertical indexing. Examples: ...
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def get_or_none(model, **kwargs): """ Gets the model you specify or returns none if it doesn't exist. """ try: return model.objects.get(**kwargs) except model.DoesNotExist: return None
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def armijo(fun, xk, xkp1, p, p_gradf, fun_xk, eta=0.5, nu=0.9): """ Determine step size using backtracking f(xk + alpha*p) <= f(xk) + alpha*nu*<p,Df> Args: fun : objective function `f` xk : starting position xkp1 : where new position `xk + alpha*p` is stored p : search ...
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def processObjectListWildcards(objectList, suffixList, myId): """Replaces all * wildcards with n copies that each have appended one element from the provided suffixList and replaces %id wildcards with myId ex: objectList = [a, b, c_3, d_*, e_%id], suffixList=['0', '1', '2'], myId=5 => objectList = [a, b, c_3, e...
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def get_remote_file_name(url): """Create a file name from the url Args: url: file location Returns: String representing the filename """ array = url.split('/') name = url if len(array) > 0: name = array[-1] return name
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