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jblitzar
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github-python

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def main():
parser = argparse.ArgumentParser(description="Update gff intervals given a RagTag AGP file", usage="ragtag.py updategff [-c] <genes.gff> <ragtag.agp>")
parser.add_argument("gff", nargs='?', default="", metavar="<genes.gff>", type=str, help="gff file")
parser.add_argument("agp", nargs='?', default="", metavar="<ragtag.*.agp>", type=str, help="agp file")
parser.add_argument("-c", action="store_true", default=False, help="update for misassembly correction (ragtag.correction.agp)")
args = parser.parse_args()
if not args.gff or not args.agp:
parser.print_help()
sys.exit()
log("VERSION", "RagTag " + get_ragtag_version())
log("CMD", "ragtag.py updategff " + " ".join(sys.argv[1:]))
gff_file = os.path.abspath(args.gff)
agp_file = os.path.abspath(args.agp)
is_sub = args.c
if is_sub:
sub_update(gff_file, agp_file)
else:
sup_update(gff_file, agp_file)
log("INFO", "Goodbye")
if __name__ == "__main__":
main()
# <FILESEP>
import requests, sys, argparse, validators, os, tldextract
from colorama import init, Fore, Style
from pyfiglet import Figlet
# INITIALISE COLORAMA
init()
# DISPLAY BANNER -- START
custom_fig = Figlet(font='slant')
print(Fore.BLUE + Style.BRIGHT + custom_fig.renderText('-------------') + Style.RESET_ALL)
print(Fore.BLUE + Style.BRIGHT + custom_fig.renderText('403bypasser') + Style.RESET_ALL)
print(Fore.GREEN + Style.BRIGHT + "____________________ Yunus Emre SERT ____________________\n")
print(Fore.LIGHTMAGENTA_EX + Style.BRIGHT + "-----> Twitter : https://twitter.com/yunem_se\n")
print(Fore.MAGENTA + Style.BRIGHT + "-----> GitHub : https://github.com/yunemse48\n")
print(Fore.MAGENTA + Style.BRIGHT + "-----> LinkedIn : https://www.linkedin.com/in/yunus-emre-sert-9102a9135/\n")
print(Fore.BLUE + Style.BRIGHT + custom_fig.renderText('-------------') + Style.RESET_ALL)
# DISPLAY BANNER -- END
# HANDLE ARGUMENTS -- START
parser = argparse.ArgumentParser()
parser.add_argument("-u", "--url", type=str, help="single URL to scan, ex: http://example.com")
parser.add_argument("-U", "--urllist", type=str, help="path to list of URLs, ex: urllist.txt")
parser.add_argument("-d", "--dir", type=str, help="Single directory to scan, ex: /admin", nargs="?", const="/")
parser.add_argument("-D", "--dirlist", type=str, help="path to list of directories, ex: dirlist.txt")
args = parser.parse_args()
# HANDLE ARGUMENTS -- END
class Arguments():
def __init__(self, url, urllist, dir, dirlist):
self.url = url
self.urllist = urllist
self.dir = dir
self.dirlist = dirlist
self.urls = []
self.dirs = []
self.checkURL()
self.checkDir()
def return_urls(self):
return self.urls
def return_dirs(self):
return self.dirs
def checkURL(self):
if self.url:
if not validators.url(self.url):
print("You must specify a valid URL for -u (--url) argument! Exitting...\n")
sys.exit
if self.url.endswith("/"):
self.url = self.url.rstrip("/")
self.urls.append(self.url)
elif self.urllist:
if not os.path.exists(self.urllist):
print("The specified path to URL list does not exist! Exitting...\n")
sys.exit()
with open(self.urllist, 'r') as file:
temp = file.readlines()
for x in temp: